| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_1938 |
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| Symbol | |
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| ID | 4599843 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 2067916 |
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| End bp | 2069697 |
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| Gene Length | 1782 bp |
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| Protein Length | 593 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639776536 |
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| Product | periplasmic component of the Tol biopolymer transport system-like |
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| Protein accession | YP_923135 |
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| Protein GI | 119716170 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.154413 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGAAGA CCTACCCCAC CCTCGCGGCG CTCTGTGTCG CCGCCGGGCT CGTCCTCCTC
GCGCCGCCGA CCGAGGTCGC GGGGGCGGCC GGGCCGGCTG CTGCGGCGAC GACGACGACC
GAGCGCGTGG CGGCGACCAC GATCGACGAC CGCCAGCTGG CGCGGTCGAA GGGCTGGGGA
GCGGTGACCG CATCGAAGGC CTATCGGCAG ACGCTCTCGA AGTCCACGAT GAAGGGAGCG
ACCGCGACGA CGAAGGCCGC GGGGTCGGGC GTCTCGGTCA CCTTCGAGTT CGGCCCCCGC
CGGGGGAAGG CCCAGATCGT CGTGGGGGGC AAGGTCCGCA CGACGGTCTC GACCGCGGCA
GCGAAGGTCC GCCTCCGGGC CGTCCAGGTC AGCGGTTCGG GCAAGGTCGA GGTGCGGGTG
GTCGTGGGCG GCAAGGGGGT CTTCCTGGAC AAGGTCGTGC TCACCCCAGG CTCCGGAGCG
GGCTCGCCGT TCGCGACCGG AGCGATCAGC CAGGTCGACG CGACGTCCGC GGGCGCCGGC
GCCAACGGGA GCTCGGTCAA CTCCGCATCG GTGTCGCCCG ACGGGAGGTA CGTCGCCTTC
TGGTCCAACG CGACCAACCT CAGCCCGGAC GCGAGCGACG GGCTCATGCA TCTGTTCGTC
AAGTCGCTGG CGACCGGAGC CATCGGGGTG GCGGACACGT CGGCCAGCGG CGTCCTGGGC
AACGACAACG GCTACACCGG TGAGGCGCGG GTGATCGGGT GGAAGCCCGG CAGCCACGAG
CTGCTCTTCA CCACCTATGC CAACAACCTG ATCGACGGGT TCACCCTCGA CGGCTCGTAC
GCCCCGTTCC TGATGGCCAA GAGCATCGAC GACGGCTCGG TGGGCTACAT CGCGGCCGCG
GTCTCCGACG CGTCGTGGTC ACCGGACGCG ACCTGGATCG CCTTCAGCTC CAAGTTCGTC
GACGGCTGCG CCACCGACCC GTGCCCGGGC AACACCAACT TCAGCTGGCA GATGTTCGCC
TGGCAGGTGG GCACGGACAC CTACGTGCCG GTCAGCGCCG ACGCGTCGGG CGCCCTGCCC
TCCGACGGGT CCGGGCCACT CGATGCTTCC GACCCCACGT GGAGCCCCGA CTCGACGCGG
GTGGCGTTCG TGTCCGCGTC CCACGAGCTG GTGCCGGGCG ACACCAACGT CAACCGGGAC
GTCTTCGTCA AGAACGTGTA CACCGGGGCC ATCGTGCGGG CGTCCGTCTC CGCCGGCGGG
GCGCAGGCGG ACAACTACAG CGGGGACCCG GCGTTCGCGC CGACGGGCAA CCGGCTGGCG
TACAGCTCCG CGGCCACCAA CCTCGTCCCC GGTGACGACA ACTCCGCCCA GGACGTGTTC
GTCAAGAACC TCGCGACCGG CGCCGTCTCG GCGGTCTCGG TGCGGCCGAA TGGTCAGTTC
GTGGTGAGTC CCGACGGCAG TCGGACTCCT GCGTGGTCCC CGGACGGCAC CAAGATCCTG
TTCACGTCAC AGGCGTTCGC CCTGGTCGAC CGAGCCGACA AGAACGTGGA GGACGACGTC
TACGTCAAGG ACCTCGCGAG TCAAGGGCTC CAGCTGGTGT CGGTGCGCCC CGACGGCACC
AACGGCACCA GCTCCTCCAC CCTGTTCGGC ATGGTGGGGT CCGCGGGTCC CGCCTGGGCG
CCCGACGGCC GGTCGGTGTT CTTCCTCTCC GCGGCGACGA ACTTCGCGGC GCAGGACAAC
AACGCCTTCC AGCGGGACCT CTTCCGCAAG TTCCTCCGCT GA
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| Protein sequence | MSKTYPTLAA LCVAAGLVLL APPTEVAGAA GPAAAATTTT ERVAATTIDD RQLARSKGWG
AVTASKAYRQ TLSKSTMKGA TATTKAAGSG VSVTFEFGPR RGKAQIVVGG KVRTTVSTAA
AKVRLRAVQV SGSGKVEVRV VVGGKGVFLD KVVLTPGSGA GSPFATGAIS QVDATSAGAG
ANGSSVNSAS VSPDGRYVAF WSNATNLSPD ASDGLMHLFV KSLATGAIGV ADTSASGVLG
NDNGYTGEAR VIGWKPGSHE LLFTTYANNL IDGFTLDGSY APFLMAKSID DGSVGYIAAA
VSDASWSPDA TWIAFSSKFV DGCATDPCPG NTNFSWQMFA WQVGTDTYVP VSADASGALP
SDGSGPLDAS DPTWSPDSTR VAFVSASHEL VPGDTNVNRD VFVKNVYTGA IVRASVSAGG
AQADNYSGDP AFAPTGNRLA YSSAATNLVP GDDNSAQDVF VKNLATGAVS AVSVRPNGQF
VVSPDGSRTP AWSPDGTKIL FTSQAFALVD RADKNVEDDV YVKDLASQGL QLVSVRPDGT
NGTSSSTLFG MVGSAGPAWA PDGRSVFFLS AATNFAAQDN NAFQRDLFRK FLR
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