Gene Noca_1935 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_1935 
Symbol 
ID4599840 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp2064963 
End bp2065976 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content73% 
IMG OID639776533 
ProductABC-3 protein 
Protein accessionYP_923132 
Protein GI119716167 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.739035 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCGACT ACCTGGACCT GCTCGGCCTG CCGTTCATGC AGCGGGCGAT CATCGCGGCG 
CTGTTCACCG GCCTGGCGGC CCCGGTCGTC GGCACCTACC TGGTGCAGCG CCGGCTCGCA
CTGATGGGCG ACGGCATCGG TCACGTCGCG GTGACCGGCG TCGCGCTCGG CCTGCTGACC
GGCGTCTCGC CGGTCTGGAT GGCGGTGCTG GTCTCGGTGC TCGGCGCGAT CCTGATCGAG
GTGATCCGCG AGCGCGGCCA CGCCAACGGC GACGTGGCGC TCGCACTCCT CTTCTACGGC
GGTCTCGCGG GCGGCGTGCT GATCACCGGC CTCGCCGGCC AGAGCGGGGC GCGGCTGCAG
ACCTACCTCT TCGGGTCCAT CACCACGATG TCGGAGGCCG ACGTCCTGGT GACGATGGCG
CTCGCGGGCG TCGTCGTCCT GCTGGGCGTC GGACTCGCCC CCCAGCTGTT CGCGGTCGCG
CAGGACCAGG AGTTCGCCCG GGTGGCCGGG CTCAACATCC GGGCCTACAA CGTCCTGGTC
GCCGTGCTGG CCGCGGTCAG CGTCAGCGTG GCGATGCGGA CCGTCGGGCT GCTGCTGGTC
TCCGCGCTGA TGGTGGTCCC GGTCGCGACC GCCCAGCAGC TGACCCGTTC GTTCCGCGGG
ACCCTCCTGG CGGCGATGGC CCTCGGGACC GTCGCCGCGG TCGGCGGGCT GCTGATCTCG
GCCGCCGCCC CCGACGGCAC CACCGTCGCC CCCGGGCCGG CGATCGTGCT GCTCGCCCTG
GGCTGCTTCA CCCTCTCCTG GCCGATCGGG GTCTGGCTGC GCGCGCGGCA GCGACTGCGC
CGCCCGTTCC CCGTCGTCAC GACCGCGGCA CACCAAGCCG TCGGGGAGGA CGAGCACCCG
CACGAGCACG GCGAGGACTG CGGTCACGTG GCGGTCCAGC ACGGCGACCA CGTCGACTAC
GTCCACGACG GCCACCGGCA CGCCCCGCAC GGGAGGCACT ATGACGAGCA CTGA
 
Protein sequence
MSDYLDLLGL PFMQRAIIAA LFTGLAAPVV GTYLVQRRLA LMGDGIGHVA VTGVALGLLT 
GVSPVWMAVL VSVLGAILIE VIRERGHANG DVALALLFYG GLAGGVLITG LAGQSGARLQ
TYLFGSITTM SEADVLVTMA LAGVVVLLGV GLAPQLFAVA QDQEFARVAG LNIRAYNVLV
AVLAAVSVSV AMRTVGLLLV SALMVVPVAT AQQLTRSFRG TLLAAMALGT VAAVGGLLIS
AAAPDGTTVA PGPAIVLLAL GCFTLSWPIG VWLRARQRLR RPFPVVTTAA HQAVGEDEHP
HEHGEDCGHV AVQHGDHVDY VHDGHRHAPH GRHYDEH