Gene Noca_1862 details

Gene Information

• Locus tag: Noca_1862
• ID: 4597182
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nocardioides sp. JS614
• Kingdom: Bacteria
• Replicon accession: NC_008699
• Strand: -
• Start bp: 1986022
• End bp: 1987971
• Gene Length: 1950 bp
• Protein Length: 649 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 639776460
• Product: amino acid transporter
• Protein accession: YP_923059
• Protein GI: 119716094

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAGACTCG ACCTCGAGCC CCAGGAGGCG CCTGCCGGGC GGCTCCGGGA GTGGCTGTTC 
CACCGCCCCG ACGCCGCACA GCACGTCGGC CCGCACGCCA CCCAACACGC CGACGGCGCA 
CCACAGCCCT GGTGGAAGGT GATGTGTCTG ACCGGCGTGG ACTACTTCTC GACGCTCGGG 
TACCAGCCGG GCATCGCGTT CCTGGCCGCC GGGCTGCTGA GCCCGCTCGC CACGATCATC 
CTCGTGCTGC TCACGCTCTT CGGTGCGCTC CCGGTCTATC GGCGGGTCGC CGCGGAGAGC 
CCGCACGGCC AAGGGTCGAT CGCCATGCTG GAGCGCCTTC TGCCGTTCTG GCGCGGCAAG 
CTCTTCGTGC TCGCCCTCCT CGGGTTCGCC CTGACGGACT TCATCATCAC GATCACGCTC 
TCCGCGGCCG ACGCCACCGC CCACCTCGTC GAGAACCCGC ACGTCGAGTT CCTGCACGGC 
CAGGAGCTCT GGGTCACGCT GGGCCTGGTC GCGCTCCTCG GCGCCGTCTT CCTGAAGGGG 
TTCACCGAGG CGATCGGTGT CGCGGTCGCC CTCGTGACGA CGTACCTGAC GCTCAACGCG 
GTGGTGATCG CAGTGTCCGC CGTGCACGTC CTCCGAGACG CCAGCCGCGT CACCGACTGG 
ACCGCCGCGC TCACCGCCGA GCACGGCAAC GTCGCCCTCA TGGTCGCGGT CTCACTCACG 
CTCTTCCCCA AGCTGGCACT GGGGATGTCG GGCTTCGAGA CCGGCGTCGC CGTGATGAGC 
CACGTCAAGG GCGAGCCGGA CGACGACACC GAACGCCCGG CCGGCCGGAT CCGCCACACC 
AAGCGGCTCC TGACCACGGC CGCCTGCATC ATGAGCGTGT ACCTGATCAG CTCCAGCCTG 
GTCACGACCC TGCTCATCCC GCCGTCCGAG TTCGAGCAGG GCGGCAGCGC CAACGGCAGG 
GCGCTGGCCT ACCTGGCACA CCTCTACCTC GGAGGGGCGT TCGGGACGGC GTACGACGTC 
TCGACGATCC TCATCCTGTG GTTCGCGGGT GCATCCGCCA TGGCCGGCAT GCTGAACCTG 
ATCCCGAGGT ACCTGCCGCG CTACGGCATG TCTCCCGAGT GGGCCGGCGC CGTGCGCCCC 
CTCGTGCTGG TGCTCACGGG CACGGCGTTC CTCATCACCT GGATCTTCGA TGCCGACGTG 
GACGCCCAGG GCGGGGCCTA CGCCACCGGT GTTCTCGTGC TGATGACGTC CGCAGCGGTC 
GCGGTCACCC TGGCTGCGCG ACGAGCAGGT CAACGCAAGC TCACGGTCGC GTTCGCGCTG 
ATCGGCCTGG TCCTGGCCTA CACGACGGCG GACAACGTGC GTGAGCGGCC CGACGGCATC 
AAGATCGGCG CCTGCTTCAT CGCCGCCATC ATCCTGGTCT CGCTGCTCTC CCGGGTGGCG 
CGGGCCTTCG AGCTCCGGAC GACCGAGATC TCCTACGACA CCCGCGCGGA CGCCTTCCTG 
CGCGACTGTG CACGCCGCTC GATCCGGCTG GTCGCCAACG AGCCGGGCGC GCACGGTCCC 
GAGGAATATC GCGCGAAGAT CCAGCAGATC ATCGACGACC ACGATCTGCC GAACGCCGGC 
GACATCATCT TCATCGAGGT CACCGTCGGC GACTACTCGG ACTTCGAGAG CCGCATCGAC 
GTCCGCGGGG AGATCCGCCA TGACCACTAC CGCGTGCTCA CGGTCACGGG CGCCACGGTG 
CCCAACACCC TGGCGGCGCT CCTGCTCGAC ATCCGCGACC GCACCGGGGT GCGCCCGCAC 
ATCTACTTCG AGTGGACGGA GGGGAACCCG GTCGCCCACC TGCTCCGCTT CCTGCTCTTC 
GGCGCCGGTG AGGTTGCCCC GATCACGCGC GAGGTGCTCC GCCGGGCGGA GCCGCAGCGG 
GCGCGCCGGC CGCACATCCA CGCCGGCTGA 

 

Protein sequence

MRLDLEPQEA PAGRLREWLF HRPDAAQHVG PHATQHADGA PQPWWKVMCL TGVDYFSTLG 
YQPGIAFLAA GLLSPLATII LVLLTLFGAL PVYRRVAAES PHGQGSIAML ERLLPFWRGK 
LFVLALLGFA LTDFIITITL SAADATAHLV ENPHVEFLHG QELWVTLGLV ALLGAVFLKG 
FTEAIGVAVA LVTTYLTLNA VVIAVSAVHV LRDASRVTDW TAALTAEHGN VALMVAVSLT 
LFPKLALGMS GFETGVAVMS HVKGEPDDDT ERPAGRIRHT KRLLTTAACI MSVYLISSSL 
VTTLLIPPSE FEQGGSANGR ALAYLAHLYL GGAFGTAYDV STILILWFAG ASAMAGMLNL 
IPRYLPRYGM SPEWAGAVRP LVLVLTGTAF LITWIFDADV DAQGGAYATG VLVLMTSAAV 
AVTLAARRAG QRKLTVAFAL IGLVLAYTTA DNVRERPDGI KIGACFIAAI ILVSLLSRVA 
RAFELRTTEI SYDTRADAFL RDCARRSIRL VANEPGAHGP EEYRAKIQQI IDDHDLPNAG 
DIIFIEVTVG DYSDFESRID VRGEIRHDHY RVLTVTGATV PNTLAALLLD IRDRTGVRPH 
IYFEWTEGNP VAHLLRFLLF GAGEVAPITR EVLRRAEPQR ARRPHIHAG