| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_1837 |
|---|
| Symbol | |
|---|
| ID | 4597675 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | + |
|---|
| Start bp | 1961071 |
|---|
| End bp | 1962216 |
|---|
| Gene Length | 1146 bp |
|---|
| Protein Length | 381 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639776436 |
|---|
| Product | FAD dependent oxidoreductase |
|---|
| Protein accession | YP_923035 |
|---|
| Protein GI | 119716070 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCACT ACGACGTGAT CGTGATCGGC GGCGGGATCG CCGGCGTCTC GATCGGGTTC
GAGCTGTCGA GGACCGCCAC GGTCTGCCTT CTGGAGATGG AGTCGACGCT CGCGTTCCAC
ACCACGGGGC GCTCGGCCGC CACGTTCCTG GAGACCTACG GCGGCCCGGA GATCCGGGCG
CTGACGACTG GGAGCCGCGA GTTCCTCGAG AACCCGCCGG AGTTCTTCGA GTCGGAGCTG
ATGACGCCGC GCCCGCTCCT GCAGTTCGCC AAGCAGGGAC GCGGTGCCGT CATCGAGCAG
CTGCACGCCG ACGTGCTGCC GCTGGTCCCG GACGCGGAGC TGCTCGGCCC CGACGAGGTC
GCCGCGCTGT TCCCCGTGGT CCGACCCGGG TACGTGGAGC GGGGCATGTA CGAGCCGGGT
GCCATGGAGA TGGACGTCGC CGGCCTGCAC CAGGGCTACG TCCGGGGCCT GAAGGCCAAC
AAGGGCGAGA TCGTCAAGAG TGCCCCGGTC GTCGGGCTGA CCCGCGGTCC GGAGAGTTGG
ACGGTCGACA CCGCCGACGG CGAGCGGCGT TCGGCCGCGG CGATCGTCGA TGCCGCGGGC
GCCTGGGGCG ACGTCGTCGC CGAGATGGCG GGCGCGAAGC CGGTGGGCCT GACGCCGTTG
CGGCGGACCA TCTTCATGGT CAACTCACCG CAGGGCGCGC AGACCAAGGA CCTGCCGATC
TTCGGTGACA TCGACCAGTC GTTCTACGTC AAGCCCGAGG GGGCGCAGTT CCTCTGCTCG
CCCGCCGACG AGACGCCGTG CCCCCCGATG GACGCGAAGG CCGACGAGCT CGAGATCGCC
CGGGCGATCG ACGAGATCAA CGCCGCCACG ACCCTGAACG CGCGCAGCGT GACCACCTCG
TGGGCCGGCC TGCGCAGCTT CGTGCCCGAC CGCAACTTCG TGGTCGGACC CGACTCCGAC
GTGCCCGGCT TCCACTGGTT CCTCGGCCAG GGCGGCTACG GCATCCAGAC GGCTCCGGCC
GCGGCGCGGG TCGGCGCGGC CCTCGTGCGG GGCGAGGAGC TGCCCGCCGA CCTGGTCGAG
CGGGGGCTCG ACGCCGCCAA GCTCGCCCCG CACCGCCCCG GCATGTCGGT CTCGGCAGGA
CACTGA
|
|---|
| Protein sequence | MSHYDVIVIG GGIAGVSIGF ELSRTATVCL LEMESTLAFH TTGRSAATFL ETYGGPEIRA
LTTGSREFLE NPPEFFESEL MTPRPLLQFA KQGRGAVIEQ LHADVLPLVP DAELLGPDEV
AALFPVVRPG YVERGMYEPG AMEMDVAGLH QGYVRGLKAN KGEIVKSAPV VGLTRGPESW
TVDTADGERR SAAAIVDAAG AWGDVVAEMA GAKPVGLTPL RRTIFMVNSP QGAQTKDLPI
FGDIDQSFYV KPEGAQFLCS PADETPCPPM DAKADELEIA RAIDEINAAT TLNARSVTTS
WAGLRSFVPD RNFVVGPDSD VPGFHWFLGQ GGYGIQTAPA AARVGAALVR GEELPADLVE
RGLDAAKLAP HRPGMSVSAG H
|
|---|
| |