Gene Noca_1792 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_1792 
Symbol 
ID4597704 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp1903997 
End bp1904941 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content76% 
IMG OID639776391 
Producthypothetical protein 
Protein accessionYP_922991 
Protein GI119716026 
COG category[R] General function prediction only 
COG ID[COG5006] Predicted permease, DMT superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.46978 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCCGCCA CGGGCGGCTC CCGGCTGCTG AGCGGGCTGG GCTTCGCGTT GCTCTCGGCC 
GTCTCCTTCG GGATGTCCGG CGCCCTCGCT CGGGAGCTCC TCGACGCCGG CTGGAGCGCC
GGCGCGATCG TGCTGGTGCG CGTCGGCCTG GCCGCGCTGG TCGTCGTCCC GTTCGGCCTG
GTCGCGTTGC GCGGCCGGTG GGGCCTGCTG CGCCGCAACG CCGGCGTGGT CGCGGTGTAC
GGCGCGCTGG CCGTCGCGGG GGCGCAGTTC TGCTACTTCT CGGCGGTCGC CCACATGCAG
GTCGGGCCGG CGCTGCTGAT CGAGTACACC GCACCCGCCG CGGTGGTGGT GTGGCTGTGG
CTGCGGCACG GGCAGCGCCC CGGGTCGATC ACCCTCGTGG GCGCCGCCCT CGCCGCCGCC
GGGCTGGTGC TGGTGCTCGA CCTGCTCTCC GGGGCCGACC TGAGCGTCCC CGGGGTGCTC
TGGGCATTGG CGGCGATGGT CGGCGCGGCG ACGTACTTCG TGATCTCCGC CGACGAGCGC
AGCGGCCTGC CGCCGATGGT GCTGGCCGCG GCCGGGCTGG TGCTCGGTGC CGCCGTGCTC
GCCGCGCTCG GGGTCGTCGG GCTGCTGCCG ATGCGCGCGT CGACCGACGC CGTCACCTAC
GCCGGCCGCA CCGTCGACTG GTGGGTGCCG CTGCTCGTGC TCGGCGTGGT GACGGCCGCC
ATCGCCTACA CCAGCGGGAT CGCCGCGGCA CGGCGGCTCG GCTCGCGGCT CGCGTCCTTC
GTCGCGCTGA TCGAGGTCCT GGCCGGCGTG GGGTTCGCCT GGCTGCTGCT CGACGAGCTC
CCGCGGGCCG TACAGCTGGT GGGCGGCCTG CTGATCCTGG CCGGGGTCGT CGCCGTCAAG
CTCGGCGAGC GCACGACCGC GGCCGTCCCC ACACCGGTTC CCTGA
 
Protein sequence
MPATGGSRLL SGLGFALLSA VSFGMSGALA RELLDAGWSA GAIVLVRVGL AALVVVPFGL 
VALRGRWGLL RRNAGVVAVY GALAVAGAQF CYFSAVAHMQ VGPALLIEYT APAAVVVWLW
LRHGQRPGSI TLVGAALAAA GLVLVLDLLS GADLSVPGVL WALAAMVGAA TYFVISADER
SGLPPMVLAA AGLVLGAAVL AALGVVGLLP MRASTDAVTY AGRTVDWWVP LLVLGVVTAA
IAYTSGIAAA RRLGSRLASF VALIEVLAGV GFAWLLLDEL PRAVQLVGGL LILAGVVAVK
LGERTTAAVP TPVP