| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_1752 |
|---|
| Symbol | |
|---|
| ID | 4597934 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | + |
|---|
| Start bp | 1863524 |
|---|
| End bp | 1864402 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 639776352 |
|---|
| Product | HemK family modification methylase |
|---|
| Protein accession | YP_922952 |
|---|
| Protein GI | 119715987 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG2890] Methylase of polypeptide chain release factors |
|---|
| TIGRFAM ID | [TIGR00536] HemK family putative methylases
[TIGR03534] protein-(glutamine-N5) methyltransferase, release factor-specific |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.724652 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCCAAC GTCGCGCGGT CGTCACGGCC GCTGCCGAGC GGCTCCGCCA CGCCGGTGTC
CCCAGCCCCG GGCACGACGC CGAGGCGCTG CTCGCGCACG TCCTCGGCAC CACGCGTGCC
GGCCTGGTCG CGGTGGAGGA CGTGGCCCCC TCGGCGCTGG AGGAGTACGA CGCGCTGGTG
GCCCGGCGCG CGGCGCGCGA GCCGCTCCAG CACCTCACCG GCAGCGTCGG CTTCCGCCAC
GTCGAGGTGG CGGTCGGCCC CGGGGTGTTC GTGCCGCGGC CCGAGACGGA GCTGCTCGCC
GGCTGGGCCA TCGAGCAGTG TCTTCGGTGG TCGAGTAGCC GTCGCGTCGG AGGAGCGACC
GCCGGTCGAA ACCCGGTGGT CGTCGACCTC TGCACCGGCT CGGGCGCGGT CGCCAAGGCG
ATCGCGGACG AGGTACCCAC CGCCGACGTG CACGCCGTCG AGCTCGACGA GGAGGCCCAC
CGCTGGGCGG GCCGCAACCT CGCCCGCACG ACCGTCGACC TGCGGCTCGG CGACATGGCG
ACCGCCTTCG ACGACCTGCT GGGGCAGGTC GACATCGTGA CCTGCAACCC GCCCTACATC
CCGCTCGACG CCTGGGAGTC GGTCGCGCCC GAGGCCCGTG ACCACGACCC GCACCTGGCG
TTGTTCTCCG GCGCGGACGG CCTCGACGCG ATCCGGGCCC TCGAGCGGCG GGCCGCCGAG
CTGCTGCGAC CGGGAGGTGT CGTCGGCTTC GAGCACGCGG ACGTCCAGGG CGAGTCGGCG
CCCGCGGTGT TCACCGCGAC CGACCGCTGG GTCGACGTCC GCGACCACGA CGACCTGGCG
GGCCGCGCGC GCTTCACGAC CGCGCGACTG GCACGATGA
|
|---|
| Protein sequence | MTQRRAVVTA AAERLRHAGV PSPGHDAEAL LAHVLGTTRA GLVAVEDVAP SALEEYDALV
ARRAAREPLQ HLTGSVGFRH VEVAVGPGVF VPRPETELLA GWAIEQCLRW SSSRRVGGAT
AGRNPVVVDL CTGSGAVAKA IADEVPTADV HAVELDEEAH RWAGRNLART TVDLRLGDMA
TAFDDLLGQV DIVTCNPPYI PLDAWESVAP EARDHDPHLA LFSGADGLDA IRALERRAAE
LLRPGGVVGF EHADVQGESA PAVFTATDRW VDVRDHDDLA GRARFTTARL AR
|
|---|
| |