| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_1679 |
|---|
| Symbol | |
|---|
| ID | 4599718 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | + |
|---|
| Start bp | 1786828 |
|---|
| End bp | 1787910 |
|---|
| Gene Length | 1083 bp |
|---|
| Protein Length | 360 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 639776278 |
|---|
| Product | dehydrogenase |
|---|
| Protein accession | YP_922879 |
|---|
| Protein GI | 119715914 |
|---|
| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.445125 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGTGAACC GTCGGCACGG CACCTCCGTG TGTGTGGGTG TGACCAGTCC TACGGACGCC
GCTGCGGCCC GGTTCACCCC GACCCGCGCC GCCCGCGCCT TCTGGGTCGG CGGGCCCGGG
CACGGCGAGC TCCGGCCGGT CGGGCCGCGT CGGCCCGCCG CCGGCGAGGT GCTGGTGCGC
ACGCTGCACT CCGGCGTGAG TCGTGGGACC GAGACGCTGG TGTTCCGCGG CCGGGTGCCC
GCCGACCAGC GTGCGGCGAT GCGCGCGCCC CACCAGGAGG GCGACTTCCC CGGGCCGGTG
AAGTACGGCT ACCTCAGCGT GGGCCGGGTC GAGGAGGGGC CCGCGGACCT CGTCGGCCGG
ACCGTCTTCT GCCTCCACCC CCACCAGACG GAGTACGTCG TCCCGGCGAC CGCGGTCGTC
CCGGTGCCGG ACGGGGTGCC GGCCCGCCGC GCGGTGCTCG CCGGCACCGT CGAGACCGCG
CTGAACGCGC TGTGGGACCT GGGGCCGCTG GTCGGGGACC GGATCGCGGT CGTGGGCGGC
GGGATGGTGG GGTGCTGCGT GGCCCGGCTG GTCGCCCGGA TCCCCGCCAC CGAGGTCACG
CTGGTCGACG TCGCCCCGGG GCGAGCCCGG GTCGCGGCCG CGCTGGGCGT CGGCTTCGCC
GTACCCGACG AGGCGCCGGC TGCGCGGGAC GCCGTCGTGC ACTGCAGCGC CACCGCCGCG
GGGTTGCAGC TCTCTCTCGA CCTGCTCGCC GCGGAGGGCA CCGTGCTCGA CCTCAGCTGG
TACGGCGACC AGCCGGTGCA GCTCTCGCTC GGCGGCGCGT TCCACTCCGG GCGGCTCGGC
ATCCGCGCCA GTCAGGTCGG AGCCGTGGCC GCGGCCCGCC GGGCCACCCG CACCCACGCC
GACCGGCTGG CGCTCGCGCT GGAGCTGCTG CGCGACCCGG CGTTCGACGC GTTGCTGACC
GGGGAGTCCG ACTTCGAGGA CCTGCCCGAC GTGATGGCCC GGCTGGCCGA CGGCCGCCTG
GACGCGCTGT GTCACACGAT CCGCTACCCG GACGTCGAGG GGGACCCGCC GTGTACACCG
TGA
|
|---|
| Protein sequence | MVNRRHGTSV CVGVTSPTDA AAARFTPTRA ARAFWVGGPG HGELRPVGPR RPAAGEVLVR
TLHSGVSRGT ETLVFRGRVP ADQRAAMRAP HQEGDFPGPV KYGYLSVGRV EEGPADLVGR
TVFCLHPHQT EYVVPATAVV PVPDGVPARR AVLAGTVETA LNALWDLGPL VGDRIAVVGG
GMVGCCVARL VARIPATEVT LVDVAPGRAR VAAALGVGFA VPDEAPAARD AVVHCSATAA
GLQLSLDLLA AEGTVLDLSW YGDQPVQLSL GGAFHSGRLG IRASQVGAVA AARRATRTHA
DRLALALELL RDPAFDALLT GESDFEDLPD VMARLADGRL DALCHTIRYP DVEGDPPCTP
|
|---|
| |