Gene Noca_1677 details

Gene Information

• Locus tag: Noca_1677
• ID: 4599716
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nocardioides sp. JS614
• Kingdom: Bacteria
• Replicon accession: NC_008699
• Strand: +
• Start bp: 1784046
• End bp: 1784765
• Gene Length: 720 bp
• Protein Length: 239 aa
• Translation table: 11
• GC content: 76%
• IMG OID: 639776276
• Product: hypothetical protein
• Protein accession: YP_922877
• Protein GI: 119715912
• COG category: [K] Transcription
• COG ID: [COG5662] Predicted transmembrane transcriptional regulator (anti-sigma factor)

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.397039
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCAGCG TCCCGCACCC GGCCGACGGC TGCGAGCTCG CCCACCTCGA CGGCGCCTAC 
GTGCTCGGCG CACTGGCGCC GGAGGAGCGG CTGGAGTTCG AGCGCCACCT GCGCGGCTGC 
AAGGACTGTG CCCGGTCGGT GCAGCAGCTC GCCGGCCTGC CGGGCCTGCT GTCCCAGGTC 
TCGGTCGAGG TCCTCGAGTC CGCGCCCGTC GACGAGCCGG TGCCCGACAC GCTCCTGCCG 
GCACTCGTGC GGGAGGTACG CCGGGGTCGC CGACGTCGGC GCTGGCTCAC CGGTCTGGCC 
GCGGCCGCCG CGGTGGTGGT GGTCGGCGCC GCGTCGGTCG CGGTCGTCAC GACGAACGAC 
GGCGACGGCG CCCCGGTCGC GGTGCCCACC GCGTCCGCCT CGGCGCGCGA GATGACCCCG 
GTCGGCGCCG ACGGCGTGAC CGGGTGGCTC TCGATGACCT CGGTCGCCTG GGGCACCCGC 
CTCGAGCTGA CCTGCACCTA CCAGGCTCCG ACCGACGGGT ACTACCAGCA AGCCGGGCCA 
CCGACGTACG AGCTGGTCGT GCGCACCCGC GACGGCGGCG TCGAGCAGGT CGCCAGCTGG 
CGCGGCCTGC CCGGCCGCAC CCTCACGATC ACCGGCGCGA CCGCGGCGTC CGTCGCGGAC 
ATCGTGTCCG TGCAGGTCCG GTCGGCCGAC GGCCACCCGG TGCTGCGGAT CAGCGGCTGA 

 

Protein sequence

MTSVPHPADG CELAHLDGAY VLGALAPEER LEFERHLRGC KDCARSVQQL AGLPGLLSQV 
SVEVLESAPV DEPVPDTLLP ALVREVRRGR RRRRWLTGLA AAAAVVVVGA ASVAVVTTND 
GDGAPVAVPT ASASAREMTP VGADGVTGWL SMTSVAWGTR LELTCTYQAP TDGYYQQAGP 
PTYELVVRTR DGGVEQVASW RGLPGRTLTI TGATAASVAD IVSVQVRSAD GHPVLRISG