| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_1629 |
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| Symbol | |
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| ID | 4600008 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 1729001 |
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| End bp | 1730425 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 639776228 |
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| Product | amidohydrolase |
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| Protein accession | YP_922829 |
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| Protein GI | 119715864 |
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| COG category | [F] Nucleotide transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
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| TIGRFAM ID | [TIGR03314] putative selenium metabolism protein SsnA |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.527588 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGACCGTG TGGTCCGGGA GCACGCTGAG GAGGATCGGA GCAGAGGAGC GCACATCGTG
GCGGCCGACA TTCGAGACGC TGTCCCCTCC TTGGCGCTGT GCGGCGCCAC GATCGTCGTC
GCGCTCGACC CTCCGGAGGT GGTCTCCGGC GACGTCGTGA TCGCGGGCGA CCGGATCCTG
ACGGTCGGCA CCGCGCCGCC CGGCGTGCCG CGGCGCGACT GCTCGGGGAC GCTGCTCCTG
CCCGGCAACG TCTGCGCCCA CCACCACCTC TACTCGGCGC TCAGTCGCGG GATGCCGTAC
CACCTCGCTC CGCCGGCCAC GTTCACCGAG ATCCTCCAGC GGGTCTGGTG GCGCCTCGAC
CGCGCCCTGG ACGAGCAGTC GATCCGGGCC TCGGCGCTGC GCGGCGGCCT CGACGCGTTG
CGTGCCGGCA CCACGACGAT CGTGGACCAC CACGCCTCGC CCAACGCCAT CGACGGCTCG
CTCGACATCA TCGCCGAGAC CCTGGCGGAG CTGGGGGTGC GCAGCGTCCT GTGCTACGAG
GTCAGCGACC GGGACGGACC CGAGCGCGCC GCCGCCGGCA TCGCCGAGAA CGGCCGCTTC
CTCGCGCGGG CGCGTGGGTT GACCCGCGGT CTGATGGGCG CGCACGCGTC GTTCACGCTC
TCCGACGGCA CCCTCGCCCA GCTGGTCGAC GCGGCCGATC GGGCCGGGAC CGGCGTGCAC
ATCCACGTCG CGGAGGACGC CGCCGACCAG GCCGACGCCC GCGCGCGCAG CAGTCAGGGG
GTCGTCGAGC GGCTCGACCG GGCCGGGGTG ATCACCGAGC GGGCCCTGCT GGCCCACTGC
GTCCACGTCA CACCGGCCGA GATCCGCGCC GTCGTCGACC TCGGTGCCAC CGTCGTCTGC
AACCCGCGCA GCAACATGAA CAACTCCGTG GGCCACTCGC CCTTCAACCA CCTCGCGCCG
GGTGTCGGCG GTGGCGTTGC CCTCGGCACC GACGGCATCG GCGGCGACCT GTTCGCCGAG
TCCCAGGTCG GCTACTTCCG GACCCGCGAG AGCGAGGTCG GAACGCCCGG CAGCTGGCCG
CTCGCGCGCC TCGCCGACGG CGCCCGCTTC GCCGGCCGCG TCCACGGGGA GCCCCTGCTC
GGCAGCCTCC GGCCCGGTGC CCCGGCCGAC CTCGTGGTGC TCGACTATCC GACGCCGACC
CCCGTCACCG CCGACAACCT GGTCGGCCAC TGGGTCTTCG GCCTGTCCTC CGCCCAGGTG
CGCGACGTGC TCGTCGCCGG CGACCTGGTC GTCGCCGACC GCCGGTCGAC CCGGGTCGAC
GAGGCGGAGG CCGCCGCGGC GGGCTCGGTC GAGGCCGAGC GGCTCTGGGC CCGGATGGAC
GCGATCCCTG CGCACGACTT CACGCCCGAG AGGAGCAGGC CATGA
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| Protein sequence | MDRVVREHAE EDRSRGAHIV AADIRDAVPS LALCGATIVV ALDPPEVVSG DVVIAGDRIL
TVGTAPPGVP RRDCSGTLLL PGNVCAHHHL YSALSRGMPY HLAPPATFTE ILQRVWWRLD
RALDEQSIRA SALRGGLDAL RAGTTTIVDH HASPNAIDGS LDIIAETLAE LGVRSVLCYE
VSDRDGPERA AAGIAENGRF LARARGLTRG LMGAHASFTL SDGTLAQLVD AADRAGTGVH
IHVAEDAADQ ADARARSSQG VVERLDRAGV ITERALLAHC VHVTPAEIRA VVDLGATVVC
NPRSNMNNSV GHSPFNHLAP GVGGGVALGT DGIGGDLFAE SQVGYFRTRE SEVGTPGSWP
LARLADGARF AGRVHGEPLL GSLRPGAPAD LVVLDYPTPT PVTADNLVGH WVFGLSSAQV
RDVLVAGDLV VADRRSTRVD EAEAAAAGSV EAERLWARMD AIPAHDFTPE RSRP
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