| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_1605 |
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| Symbol | |
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| ID | 4599984 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | - |
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| Start bp | 1704201 |
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| End bp | 1706894 |
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| Gene Length | 2694 bp |
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| Protein Length | 897 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639776205 |
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| Product | hypothetical protein |
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| Protein accession | YP_922806 |
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| Protein GI | 119715841 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3127] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.453763 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCTCG TGCGGGAGGG GGTGCGCCAG CACCTGACTT GGATCTCCGG CTCGACCCGG
CGACGCCGAG GCCGCTTCCT CGCCGCGACC GCCGGGGTTG TCCTGACGGT CACCACCCTG
GCGTTCCTCG CCATGTTCAT CAGCGCCTCA CGGGCCACGA TGACCGCCCG TGCGGCCAGC
AGCGTCGCCG TGGACTGGCA GGTCGCCCTC GACAACCCCG CCGACGCCAC CCGCGTCACC
GATACCCTCA CCGCCCGTGG AGACGTGACC ACGGTCGACC CGGTCCACTT CTTCACCGCA
CGCGGGATCG AGGCGACGAC CGACGGAACC CGCCAAGTGA CCGGCAAGGC CGCCGTCCTC
GGCCTCCCGA CGACCTACAC CCACGACTTC CCCGCTGCGG TCAGAACCCT CGTCGGCGCC
GACACCGGCG TGCTCCTCGC GCAACAGACC GCCGCGAACC TGCACGTGAA ACCGGGCCAG
GACATCACTC TGCTCTGGGG CGACCGGCCA GCCACCGTCA CCGTCGACGG CGTGGTGGAG
CTCCCCCAGG CGGACTCACT GTTCCAGAAG GTCGGAGCCC CACCCCAGTC GCAGCCACTG
GCGCCCCCGG ACAATGTGGT GCTCCTGCCC GACGCAGTCG CACAACGACT GGCCGCCTCC
TCCGGTGTCA CTCCCAAGGT GCAGCTGCAT GTCGCGCTGG AGGACCACCT GCCCGCAGAC
CCCGCGTCCG CCTACGCCGC GACACTGGCC GACGCCAACA ACCTCGAAGC CGACCTCGCC
GGCTCGGTGA AGGTGGGCAA CAACCTCGGC GCCGCCCTGG ACGCGGCCCG CGAGGACGCG
GCGTACTCCC AAATCCTCTT CCTGTTCCTC GGCGCCCCCG CCGCAATCCT GGCGGCCCTG
CTGACCGCCG TGGTGGTCGG CTCCAGCGGT GACCGCCGCC GCGCCGAGCT CGCCCTACTG
CGTTTGCGAG GCGCTCGGCA CCGGACGGTC CTGAGCCTCG TCGCCGCCGA AGCCGCGTGT
GTCGGAGCGC TGGGCACGCT TCTCGGGCTC GGCGTGGCCA TGCTCGCCGG CCGACTCGCC
CTGCACAGCA TCACCTTCGG CGCGACGGTG ACCGCCGGCG TCGTGTGGCT CGTGGTCATC
GGCACCGTCG GTCTCCTCAC CGCCCAAGCC TGCTACCTTC TGCCCGCCGC ACGAGACCTG
CGCACCCTCA CCGTCGCCGA CAGCCGGCGC CAGGTCGACC GGGCCGGCGC TCGACCCCGG
TACGCCGGAC TCGCGATCGC CCTGGTCCTA CTTGCGGGAG CCGGACTGGT GTTCTGGGCC
ACTTCGCGCA ACAAGTACGC CCTCGTACTC GCCCCCGAAG GCGTGCCCAA GCTGTCGATC
AGCTACTGGG CTTTCGCCGC CCCCGCCCTC CTGTGGATGG GGGCCTATCT CGTGACCCGC
GACGGCGCGT CCCTCTTCCT GCGACACGGG CGAGGACCGC TGACCAAGGC CCTGTCACCG
CTGAACCGGC GGATCACCTC CACCGTTGTC GCCGGGATCG TCCGCAACCG AGGAGTCATC
GCCCGAGCCT CGACCCTGCT CGCCCTCGCC GTCGCCTTCG CGATCTCCGC CGCCACCTTC
AACAGCACCT ACGCCCAGCA GGCCGAGGTC GACGCCCAGC TCACCAACGG CGCGGACGTG
CAGGTGGCCT TCCCCGCCTC CGGACCCGCT GCCGACCCTG CCACCGTGCA CGCCCGCGCA
CGACAGCTCG ACACGCTGAA CGGCGTGCGT CACGTCGAAC CGATGCAGCA CCGGTTCGCC
TACGTCGGCA ACGACCTCCA GGACCTTTAC GGCATCAACA CCCAAACCAT TCCCACGGTC
ACCACGCTCC AGAGCGCCTA CTTCCAGGGC GGCACCGCCA GCCAGATCCT CACCCGCCTG
CACGACACCC CCTCCGGGGT GCTGGTCAGC GCCGAGACCG TCACCGACTT CAACCTCGCC
CTCGGCGACC ACCTCACCCT GCGGCTGCGC GACGGCGCGA CCGGGAGCCT GCGGCCGGTG
CAATTCACCT ATGTCGGCGT CGCCAACGAG TTCCCGACCG CCCCCAAGGA CAGCTTCCTC
GTGACCAACG CCTCCTACGT CGCCCAGCAG ACCCACGACC CCTCCACCAG CACCTTGCTC
ATCGACACCA CGCCAGGGCA GGAGCGCGCC GTCGCCTCCA GCGTGCGCAA GGAGCTGGGC
ACCTCGGCCG TGGTCACCGA CATCACCCAG ACCCGCGGTC TGATCGGATC CAGCCTGACC
GCAGTCGACC TGCGCGGACT CACCCGTGTC GAGCTCGCCC TCGCAGCCAT CCTCGTATTG
GCGGCCGCGA CTCTGGTCAC CGGCCTACAA CTCGCCGAAC GTCGACGCAC CTTCGCCATC
GCCTCGGCGC TCGGCGCCCG ACGCCGGCAG CTCGTCAAAC TCGCCGTCAG CGAAGCCGCC
GTTACCAGCG CGATCGGCCT GGCCGCCGGA GGGCTCATCG GGTGGGCAAT GAGCCGGATG
CTGGTCAAGG TGCTCTCCGG AGTCTTCGAC CCACCGCCAG CAGCGCTCGC GATCCCCTGG
GCCTACCTGA CGTCCATAGC TGTGGCGGCT CTCGCCGCCG TCGCGGCAGC CAGCGCCGTT
GCTTCGCGCC TCAGCGCCAG CACTACCGTC GCGGATCTGC GTGAACGCGA CTGA
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| Protein sequence | MTLVREGVRQ HLTWISGSTR RRRGRFLAAT AGVVLTVTTL AFLAMFISAS RATMTARAAS
SVAVDWQVAL DNPADATRVT DTLTARGDVT TVDPVHFFTA RGIEATTDGT RQVTGKAAVL
GLPTTYTHDF PAAVRTLVGA DTGVLLAQQT AANLHVKPGQ DITLLWGDRP ATVTVDGVVE
LPQADSLFQK VGAPPQSQPL APPDNVVLLP DAVAQRLAAS SGVTPKVQLH VALEDHLPAD
PASAYAATLA DANNLEADLA GSVKVGNNLG AALDAAREDA AYSQILFLFL GAPAAILAAL
LTAVVVGSSG DRRRAELALL RLRGARHRTV LSLVAAEAAC VGALGTLLGL GVAMLAGRLA
LHSITFGATV TAGVVWLVVI GTVGLLTAQA CYLLPAARDL RTLTVADSRR QVDRAGARPR
YAGLAIALVL LAGAGLVFWA TSRNKYALVL APEGVPKLSI SYWAFAAPAL LWMGAYLVTR
DGASLFLRHG RGPLTKALSP LNRRITSTVV AGIVRNRGVI ARASTLLALA VAFAISAATF
NSTYAQQAEV DAQLTNGADV QVAFPASGPA ADPATVHARA RQLDTLNGVR HVEPMQHRFA
YVGNDLQDLY GINTQTIPTV TTLQSAYFQG GTASQILTRL HDTPSGVLVS AETVTDFNLA
LGDHLTLRLR DGATGSLRPV QFTYVGVANE FPTAPKDSFL VTNASYVAQQ THDPSTSTLL
IDTTPGQERA VASSVRKELG TSAVVTDITQ TRGLIGSSLT AVDLRGLTRV ELALAAILVL
AAATLVTGLQ LAERRRTFAI ASALGARRRQ LVKLAVSEAA VTSAIGLAAG GLIGWAMSRM
LVKVLSGVFD PPPAALAIPW AYLTSIAVAA LAAVAAASAV ASRLSASTTV ADLRERD
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