Gene Noca_1573 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_1573 
Symbol 
ID4595513 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp1667791 
End bp1668837 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content69% 
IMG OID639776172 
Productpeptidase M23B 
Protein accessionYP_922774 
Protein GI119715809 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0739] Membrane proteins related to metalloendopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0724492 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCCGGGA AGGCGACGTA CGCCGTCGGG ATGCTGGCGG TTCCGATCGC GGTCCCGATC 
ATCTTCCTGC TCGTGGTCGG CGGCCAGGCG GCGTCATCGT CCGCCTCGGC GTGCGGGCCG
TCGATTGCCG GTGTCGTCGC TGAAGATCCC GATCTCGACG ATGAGCAGAT GCAGGTCGCT
CGGCAGATCG TGGCCGCCGT GCGCGCCTTT CCCGCGACTG CCGACAAGCC GCATGCCGCT
GTGATCGCCC TGGCCACCGC GAGGCAGGAG TCCGGCATCC GGAACCTGGA CTACGGCGAC
CGCGACTCGC TCGGCGCGTT CCAGCAGCGC CCGTCGCAGG GGTGGGGCAC GCCGGACCAG
GTGATGAACG TTCCGCACGC CACGACGACG TTCCTGGAGC ACCTCGTGCT CGTCCCCGAC
TGGGAGACGC GGCGCGTCAC GGACGTCGCC GCCGACGTCC AGCGGCCGGC CAAGGAGTAC
CGGGGCTTGT ACGAGCAGTG GGTTCCTCTC GCGACTCGCC TCACCGAACA GCTGTGGCCG
CAGGCCGCGT CGCTGATGCC AACGAACTCG TCGACCTGCA CACAGCCGGC GACCGGCACC
GGTGGCGTTG TCTACCCGGT GCCTCCGGCG TTCATCGGGG CTGACAGCCA CAACTGGGGA
GGAAGCGGGA GCCACTGGAG CATTTGGCAT ACGGGCACGG ACTTCTCCGT CCCGTGCGGG
ACACCCGTCC TCGCCGCGAC GGCAGGCACC GTAGAGATCG AAACCGACCA GGCGTGGGCG
GGCACGTGGC TCGTCAAGGT CGTCACCAGC CCGGACTCGG TCGCCACCTG GTACGCGCAC
ATGCAGAAGC TCGACGTGAG CCCGGGCGAG CAGGTCAGGG CCGGGCAGCA ACTCGGCGAG
GTGGGCGCCC GTGGGAATGC CACCGGCTGC CACCTGCATT TCGAGGTGCA CCTGCACAAC
GGCAGCATCT ACGGACCCGA CAACGTCGAC CCGAGTCAGT GGCTCGCGCA GAACACCTCC
CTGGCCAGCG CGACGCTGCG AGGATGA
 
Protein sequence
MAGKATYAVG MLAVPIAVPI IFLLVVGGQA ASSSASACGP SIAGVVAEDP DLDDEQMQVA 
RQIVAAVRAF PATADKPHAA VIALATARQE SGIRNLDYGD RDSLGAFQQR PSQGWGTPDQ
VMNVPHATTT FLEHLVLVPD WETRRVTDVA ADVQRPAKEY RGLYEQWVPL ATRLTEQLWP
QAASLMPTNS STCTQPATGT GGVVYPVPPA FIGADSHNWG GSGSHWSIWH TGTDFSVPCG
TPVLAATAGT VEIETDQAWA GTWLVKVVTS PDSVATWYAH MQKLDVSPGE QVRAGQQLGE
VGARGNATGC HLHFEVHLHN GSIYGPDNVD PSQWLAQNTS LASATLRG