Gene Noca_1542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_1542 
Symbol 
ID4595482 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp1635595 
End bp1636494 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content70% 
IMG OID639776141 
Productintegral membrane protein 
Protein accessionYP_922743 
Protein GI119715778 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTCGTGA TGGCGATGCT CGGCTTCGTC CTCGCAGTCG CGGCGGCGGC TCTGGGGCTG 
CTTGTCATCC TGCGCCTGTC CCGCGGACTG AGTGCGATGC CCAGGATCGA GTTGCGGCCG
TCACTCGACC GACACCAGAC CCGGCAGGTC GGCGTCGCCC TCGCGGCCGG TCTCGTCGTG
CTGCTCATCA CCCGATGGGC GTTGGCCGCC CTCGCGGCCG GTGCCGTCGT CTACCTGTGG
CCGCGACTGT TCGGCGGTGG CCGAGCCGGT CGGCGGCAAC TGGAGAAGAT CGAAGCGCTC
GCAGCCTGGA CGGAGAGTCT CCGGGACACG GCGACGGCTG CGGCGGGACT TGAGCAGGCG
ATTCCGGCGA CAGTGGGCGC CGCTCACGCA TTGCTGCGGG CACCGGTTCG CGATCTCGCG
GCCCGGCTGG ACGGACGCGT GCCGCTGCCC GAGGCGCTGG CGCGCTTCGC CGACGACGTC
GACGACCCCG CCGCGGACAT GGTGGTTGCC GCGCTGTCCC TCAACGCCAG GCAGCGCGCC
GGAGGCCTCG AGCGGATCCT GACCTCACTC GCCGCCTCGT CTCGCACCGA ACTCGAGATG
CGCCGCAAGG TCGAGCACGA GCGTCGAGCC CTGCGGAGGC AGGCGCAGCG GATCGCGTTC
GCCGTGCTCG GCTTCGTCGC GCTGCAGGCT GTGTTCGCTC GAGGCTGGGT CGAACCGTAC
TCGACACCAC TCGGCCAACT CGTCCTCGCG ATCCTCGCCG CGATCTTCGT CGGGTCGTTC
GTGCGCATGA GGTCGCTCTC CAACGGCGAG GTCGAGGCCA AATTCTTGAC CTCCCCGCGC
GACATCACCG AGATCGCCTC CTACAAGCCG CACCCTGTGC GGATAGGAGG CCGCACGTGA
 
Protein sequence
MVVMAMLGFV LAVAAAALGL LVILRLSRGL SAMPRIELRP SLDRHQTRQV GVALAAGLVV 
LLITRWALAA LAAGAVVYLW PRLFGGGRAG RRQLEKIEAL AAWTESLRDT ATAAAGLEQA
IPATVGAAHA LLRAPVRDLA ARLDGRVPLP EALARFADDV DDPAADMVVA ALSLNARQRA
GGLERILTSL AASSRTELEM RRKVEHERRA LRRQAQRIAF AVLGFVALQA VFARGWVEPY
STPLGQLVLA ILAAIFVGSF VRMRSLSNGE VEAKFLTSPR DITEIASYKP HPVRIGGRT