Gene Noca_1539 details

Gene Information

• Locus tag: Noca_1539
• ID: 4595691
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nocardioides sp. JS614
• Kingdom: Bacteria
• Replicon accession: NC_008699
• Strand: +
• Start bp: 1632796
• End bp: 1633488
• Gene Length: 693 bp
• Protein Length: 230 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 639776138
• Product: SAF domain-containing protein
• Protein accession: YP_922740
• Protein GI: 119715775

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGACCG ATACTGGCAG GCGTACGTCG GCAGATCAGC AGCCACGCGC CACCAAGCCT 
CGCCCGAAGT CCCTCGGCCA CGACCTGCCT CGAGTTCCCC GCCGCTACGG GCAGTGGGCG 
GGAGCCGTGC TGTTCGTCGT CATGGCCGTC CTGCTGGCCG GGTGGTTCTG GCAGCAGAAG 
AGCGACCGGG AGGCCGTCCT CGCGATCGAT CACTCGGTTC CGGCAGGAGC GGTCATCGCC 
AAGGACGACT TGAGGATCGT CGAGGTCGCC GGTGTCGACT CCACGATCAG CTCGGAAGAT 
GCCCAGACCG TCATCGGGTC GACCGCCGCG GTCGGCCTCG TGGAAGGTCA GATCCTGACG 
CCCGACATGG TCACGTCCAA GCCGCTGCCG GGACCGGGCG AGCGCGTCGT CGGCCTGCAA 
CTGGACGCCA CGCGGGCGCC GACGGGCCTG CTTCCCGGGG ATGTGGTCGT CGTGATCGCC 
GTGCCACCTG CCGGAGATCC GAGCTCGCCC GCCGAACTGG ACGACCCGAC AGTCCTGGCA 
CCGCAAGCCA CCGTCGCATC GGCCGATGTC GTCGAGGGAG CCGGGACGCG CCTGACGCTC 
GTCGTGCCGG AGGCGGTTGC CGAGCGGGTC ACGGCGTACG TCGCCGCGGG ACGTGTGGCG 
CTGGTCCAGG CGCCGATCGG GGGTGACGGC TGA 

 

Protein sequence

MTTDTGRRTS ADQQPRATKP RPKSLGHDLP RVPRRYGQWA GAVLFVVMAV LLAGWFWQQK 
SDREAVLAID HSVPAGAVIA KDDLRIVEVA GVDSTISSED AQTVIGSTAA VGLVEGQILT 
PDMVTSKPLP GPGERVVGLQ LDATRAPTGL LPGDVVVVIA VPPAGDPSSP AELDDPTVLA 
PQATVASADV VEGAGTRLTL VVPEAVAERV TAYVAAGRVA LVQAPIGGDG