| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_1528 |
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| Symbol | |
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| ID | 4595679 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 1620638 |
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| End bp | 1621702 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639776126 |
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| Product | PDZ/DHR/GLGF domain-containing protein |
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| Protein accession | YP_922729 |
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| Protein GI | 119715764 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3480] Predicted secreted protein containing a PDZ domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.194466 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCAGC GCACCCTGGC CGGGCTCCTC GCCGTGCCGC TGCTGATCGG GCTGTGGGTG
ACGGCTGCGC TCAAGCCGCT GCCGTTCGTC ACCTACGAGC CGGGGCTCAC CCTGGACGTG
CTGGGGACCA ACCAGGAGGG CAAGGAGATC ATCGAGGTCA GCGGGCACCC GGTCTACCGC
GACGCGGGCG AGCTCCGGAT GACCACGGTG TACGTGTCCC AGCCGGAGCC GAAGGGCAGC
AACAGCCTGT TCGAGCTGAT GCGGGACTGG CTCAGCGACG AGGATGCCGT CTATCCCTAC
GACGCTGTCT ACCACGAGGG CGAGACCGTC GAGCAGAACC GGCAGGAGGG CGCCCAGGAG
ATGACCAGCT CCCAGGACGC CGCTACCGCG GTCGCCCTGG AGGAGCTGGG CTACCACGTG
ACCGAGGCGG TCGTCGCCGG CGTCGCGAAG GGTACGCCGG CCGACGGGGC CCTCGAGACC
GGCGACGTGC TGCTGCGGGT GGACGACACC CCGGTCTCGA CCGCCGCCGA CGTCGTGGAC
TCGGTGGGCG GGCTGCGAGA GGGCCAGCCG GTCCGCCTGG AGATCAGGCG GGACGGCGAG
CGCCGCACGA TCTCGATCAC CCCGGAGCTG ACCGACGGAC GGCCGCAGCT CGGCATCCAG
ATCGGCACCC AGGCCAAGGC CGACCTGCCG GTCGAGGTCG ACATCGCCAT CGACCCGAGC
ATCGGCGGGC CGAGCGCTGG GCTGATGTTC TCCCTGGCCA TCTACGACAC CCTGACCCCC
GGCTCGCTGA CCGGCGGGGC CACGGTCGCC GGCACCGGCA CCATCGACGC CGCGGGCAAG
GTGGGCCCGA TCGGCGGCAT CCAGCAGAAG ATCGTCGGCG CCCGCGACGC CGGCGCCGAG
CTCTTCATGG TGCCGCCGGA CAACTGCGAG GAGGCGCTGG GCGCCCCCAA CGGCGACCTG
CGGCTGGTGC GCGCCGACAC GATGCACGAC GCCCGCGTGG CCATCGCCGC CTGGGTCAAG
GACCACGACG CGGACCTGCC GAGCTGCGAG GAGAGCCAGA AGTGA
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| Protein sequence | MTQRTLAGLL AVPLLIGLWV TAALKPLPFV TYEPGLTLDV LGTNQEGKEI IEVSGHPVYR
DAGELRMTTV YVSQPEPKGS NSLFELMRDW LSDEDAVYPY DAVYHEGETV EQNRQEGAQE
MTSSQDAATA VALEELGYHV TEAVVAGVAK GTPADGALET GDVLLRVDDT PVSTAADVVD
SVGGLREGQP VRLEIRRDGE RRTISITPEL TDGRPQLGIQ IGTQAKADLP VEVDIAIDPS
IGGPSAGLMF SLAIYDTLTP GSLTGGATVA GTGTIDAAGK VGPIGGIQQK IVGARDAGAE
LFMVPPDNCE EALGAPNGDL RLVRADTMHD ARVAIAAWVK DHDADLPSCE ESQK
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