Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_1509 |
Symbol | |
ID | 4595660 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | + |
Start bp | 1602119 |
End bp | 1605340 |
Gene Length | 3222 bp |
Protein Length | 1073 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 639776107 |
Product | UvrD/REP helicase |
Protein accession | YP_922710 |
Protein GI | 119715745 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0210] Superfamily I DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.254062 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCGCC GGATCAGCAC GCCCGAGGAG CTCGCGGCCG TGATGCGCAC GCCGTACGCC CCCAGCGACC AGCAGTGGGC CGCGATCTCC GCCCCGCTCG CGCCGGCCGT CGTCATCGCC GGCGCCGGGT CCGGCAAGAC CACGTTGATG GCCGCGCGCG TCGTCTACCT CGTCGTCACC GGGCAGGTGC GCCCCGACGA GGTGCTCGGC CTGACGTTCA CGACCAAGGC CGCGAGCGAG CTGCGCCAGC GGATCCGCCA GGCACTGAAG GCCGCCGGCG CCCTGGAGGA ACCGGAAGAG GCCCCTGGTG ACGGGCAGAG CGACGTCCTC GAGCCGACGG TCGCGACCTA CAACGCGTAC GCCGCGGGCC TGCTGACCGA CCACGGCCTG CGGATCGGCC ACGAGCCGGA CACGCGCGTC ATCACCGACG CCGCCCGCTA CCAGCTGGGA GCTCGCGCGG TCGACCGCTA CACCGGCGAC GTGCGCTACC TCTCCGACCA CCCCGAGACG GTGATCCAGA ACCTCCTCGC CCTCGACAGC GCGATGAGCG AGCACCTCGT CGGCCCCGAC GCCGTGCGCG AGATCGACAC CGAGGCGTGC CGGGGCTTCG AGGCCGCGCT CGCCGAGGAG GTCGCCGGCA AGAACCGCGT CACCTACCGC GAGGCGATCG AGAAGGCCAT CTCGGCGATC GACCGGCGGG GCGAGCTGCT CGGCCTGGTC GAGGCGTACC GACGGCTCAA GCGCGACCTC GGTCTGATGG ACTTCTCCGA CCAGATCGAG CTCGGCGCCC GGCTGGCCAG CGAGCAGCCG GACGTGGGGG AGCTCGAGCG GTCCCGGTTC AAGGTGGTGC TGCTCGACGA GTACCAGGAC ACCTCGGTCG CCCAGGCCGT GATGCTGTCC CGGCTCTTCT CCGGCGGCCA TCCGGTGACC GCGGTCGGCG ACCCGAACCA GGCGATCTAC GGCTGGCGTG GCGCCTCGGT CTCGAACATC CTCAACTTCG CCGACACCTT CCCGGCCGCG GGCTCACGAG CCGTCCCGAC GTACCCCCTC ACGGTCAACC GGCGCTCGGA CGCCCGCATC CTCGAGGTCG CCAACCGGCT GGCCGCGCCG CTGTACGAGA AGTACGGCCA GGTCGAGCCC CTGGTCGCCA AGCCCGAGGC CGAGACCGGC ACGGTCACCA CGCAGGTGTT CGAGACGCAC GCCGACGAGC TGGCCTGGCT GGTCGGCGCG GTGAAGGAGG CCCACGAGGG GCTGCCCGCC GACGGGGGCT GGGCGCAGAT CGGCGTGCTG ACCCGCGACA ACGCACACGC CGAGGACGTC TTCGACGCGC TGACCAGCGC CGGCGTCCCC GTCGAGATCG TCGGCCTCTC CGGCCTGCTC CGGCTGCCCG AGGTCGCCGA GATCGTCGCC ACCCTGACCC TGCTGCACGA CGTCACGGCG AACGCCGCGC TGCTCACCCT GCTCACCGGG CCGCGCTGGG CGATCGGCCC GCGCGACCTG CGGCTGCTCG GCCGGCGCGC GCTCGAGATC GCCGGCCGGC ATGGTCGCGG TGCCGACGCC GCGTCGATCA CCGACCAGCT CCTCGAGATC GCCGACGGCA TCGACCCCGC CGAGCTCCCG TCGCTGGACG ACGCGCTCGC CGACCCGGGG GAGCACGCCT ACTCGCCCGA GGCGCTGGAG CGCTTCGGGC TGCTGTCCGC CGAGCTCCGC ATGCTGCGCA CGTACGTCGG GGAACCCCTG CTCGACATCG TCCGCCGGAT CATCGACACC AGCGGCACCG ACGTCGAGCT CGGCTCGGCG GTCAGCCCGG CGGCCGCGGC CCGCCGCGAC AACCTCGACC TGTTCGTGAA GGCGGTCGCC GAGTTCCAGG CCGTCGACGG GGACGTGACG CTGCCCGCGC TGCTCGCCTA CCTGACCGCC GAGGACGACC AGGGCAACGG CCTCGACGTC GCGACCCCGA CCGAGGCCGA CTCGGTCAAG CTGCTCACCG TGCACCGGGC CAAGGGCCTG GAGTGGGACT CGGTCTTCCT CGTCGGCGTC TGCGAGACCC GGTTCCCGTC CAACCGGTCC CGCACGCTGT GGACCTCCTC GCCGGCGATC CTGCCGGCAC CGCTGCGAGG CGACGCCGGC GACCTGCCGC AGCTGGCCGG TCACGACAAG GCCGCGCTCG ACGCCTACCG CGCCGCCACC CGCGACCACG ACGCCGAGGA GGAGCTCCGG CTCGGGTACG TCGCCTTCAC CCGGGCCGCC CGCCGGCTGT CGGTCACGTC GTACCTCTGG AGCCCGCGGG CCACGCCGTT CGGCCCGTCC GCCTACCAGC AGGTGGTCCG CGACCAGCTC CACGACTGGG CGGAGCCGCC CACCTGGCTG GCCAGGCCCG AGAAGGGTGA CCCGAACCCC TACGACGCCG TCGATCCGTC GCGGCCGTGG CCGGCGACCG GCACCGGCCG CGAGGCGGCG CTGCGGATCG AGGCGGCCCG CCGGGTCCGC GAGGTCGACG CTGCGGCCGT CGACGCGGGC CTCGACATGA TCGAGACCGC GCGGGTGGCC GAGTGGGACG CCGAGCTCGA GCGGCTGCTC GCCGAGGCCC GGCGCGACCG CAGCACCGAC CTCGCCGTCC CGCTGCCCCC CAGCCTGTCC GCCACCGCCC TCGCTCGGCT CCGCGAGGAC CCCGAGACGT TCGCCCGCGA GCTGGCCCGG CCGATGCCCC GGCCGCCGTC GTCTGCGGCG CGGTTCGGCA CCCGCTTCCA CGCCTGGGTG GAGGCACGGT TCGGCCAGCA GGACCTGTTC GACTACGGCG ACCTGCCCGG CCGGGCCGAC GCCGGCATCG ACGACGACTC CGACCTCAAG GAGCTGATCG CGACCTTCGA GGCCGGCCCC TTCGCGACCC GGACGCCGCA CCAGGTGGAG GCGCCGTTCG CGCTCGTGCT CCGTCATCCG GGTGGGCCCG GCCAGGTGGT GCGCGGTCGG ATCGACGCGG TGTACGCCGA GTCGACGCCC GAGGGCGACG GGTTCCTCGT CGTGGACTGG AAGACCAACC GCGCCGCGAC CGCCGACCCG CTCCAGCTCG CGCTGTACCG ACTCGCCTGG GCCGAGCTCC ACGACCTGCC GCTCGAGCGG GTCCGCGCGG CGTTCTACTA CGTCCGCACC GGCGAGGTGG TCGAGCCGCC GGACCTGCCG GACCGGGCTG CGCTGGAAGC GCTGCTGGAC GGCACCTCCT GA
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Protein sequence | MSRRISTPEE LAAVMRTPYA PSDQQWAAIS APLAPAVVIA GAGSGKTTLM AARVVYLVVT GQVRPDEVLG LTFTTKAASE LRQRIRQALK AAGALEEPEE APGDGQSDVL EPTVATYNAY AAGLLTDHGL RIGHEPDTRV ITDAARYQLG ARAVDRYTGD VRYLSDHPET VIQNLLALDS AMSEHLVGPD AVREIDTEAC RGFEAALAEE VAGKNRVTYR EAIEKAISAI DRRGELLGLV EAYRRLKRDL GLMDFSDQIE LGARLASEQP DVGELERSRF KVVLLDEYQD TSVAQAVMLS RLFSGGHPVT AVGDPNQAIY GWRGASVSNI LNFADTFPAA GSRAVPTYPL TVNRRSDARI LEVANRLAAP LYEKYGQVEP LVAKPEAETG TVTTQVFETH ADELAWLVGA VKEAHEGLPA DGGWAQIGVL TRDNAHAEDV FDALTSAGVP VEIVGLSGLL RLPEVAEIVA TLTLLHDVTA NAALLTLLTG PRWAIGPRDL RLLGRRALEI AGRHGRGADA ASITDQLLEI ADGIDPAELP SLDDALADPG EHAYSPEALE RFGLLSAELR MLRTYVGEPL LDIVRRIIDT SGTDVELGSA VSPAAAARRD NLDLFVKAVA EFQAVDGDVT LPALLAYLTA EDDQGNGLDV ATPTEADSVK LLTVHRAKGL EWDSVFLVGV CETRFPSNRS RTLWTSSPAI LPAPLRGDAG DLPQLAGHDK AALDAYRAAT RDHDAEEELR LGYVAFTRAA RRLSVTSYLW SPRATPFGPS AYQQVVRDQL HDWAEPPTWL ARPEKGDPNP YDAVDPSRPW PATGTGREAA LRIEAARRVR EVDAAAVDAG LDMIETARVA EWDAELERLL AEARRDRSTD LAVPLPPSLS ATALARLRED PETFARELAR PMPRPPSSAA RFGTRFHAWV EARFGQQDLF DYGDLPGRAD AGIDDDSDLK ELIATFEAGP FATRTPHQVE APFALVLRHP GGPGQVVRGR IDAVYAESTP EGDGFLVVDW KTNRAATADP LQLALYRLAW AELHDLPLER VRAAFYYVRT GEVVEPPDLP DRAALEALLD GTS
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