| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_1488 |
|---|
| Symbol | |
|---|
| ID | 4596304 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | + |
|---|
| Start bp | 1574954 |
|---|
| End bp | 1576417 |
|---|
| Gene Length | 1464 bp |
|---|
| Protein Length | 487 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639776086 |
|---|
| Product | xanthine/uracil/vitamin C permease |
|---|
| Protein accession | YP_922689 |
|---|
| Protein GI | 119715724 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG2233] Xanthine/uracil permeases |
|---|
| TIGRFAM ID | [TIGR00801] uracil-xanthine permease |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGATGT TCAAGTGGGA GTTGGTCGAT CCCAAACCTG GTGAGGCCGT AGCGCCGCAC
CAGCGGCTCA GCTGGGGCAA GACGGTGGGC CTCGGCGCCC AGCACGTCGT GGCGATGTTC
GGGGCGACGT TCGTCTTCCC GCTGATCATG GGCCTCAATG CCAACCTCGC CATCATGATG
AGCGGCATCG CGACGATCTG CTTCCTGCTG ATCGTGCAGG GCAAGGTGCC GAGCTATCTG
GGGACCTCGG CCTCGTTCGT GGGCGCCGCG GCGGCCATCT ACGCCTACCA GGGCGGCGAC
GGGCCGGGCG GCCCCGCCGA CGTGACGGGC GCGATCCTGG TCGCCGGCAT CGTGCTGGCC
ATCGTCGGCG TGATCGTCCA CTACCTCGGC GCCGACTCGG TCAACGCCGT GCTGCCGCCG
GTCGTCACCG GGGCCGTGGT CATGCTGATC GGCTTCAACC TGGCTCCGGT CGCGACCCTC
ACCTACATGC CCTCCGACCC GTGGGTCGCG CTGATCACGA TGACTGCCGT CATCTTGATG
GCGGTCGGCC TCCGCGGCTT CTTCGGCCGG ATCGCGGTGT TCCTCGGCCT GATCTTCGGC
TACCTGCTCT CGGTGGTCTG GGACTGGATC TTCGGCCAGA GCACGCTGCC GCTGCCCGGC
AACCCCGAGC CCGGCCCGCA CGACCGCGTC AACTGGGACG CCGTCAAGAA CGCCGACTGG
TTCGGCTTCC CGGTCCACAC CAAGGACGGG CTCGTCGGCA ACCAGGCCTT CACCGACGGC
TACGCGAACG TCGGCTGGCA CATGCCGTCG TTCTCGATCG CGTTCATCCT GCTCGCGCTG
CCGGCGGTCA TCGCCCTGGT CGCCGAGAAC ATCGGCCACG TCAAGGCAGT GGCGGAGATG
ACCAAGACCG ACCTCGACCC GGTCATGGGC CGGGCGATCG CCGCCGACGG TGTCGGCACG
GTCATCGCCT CGACGGTCGG TGGCTCGCCG ACCACGACGT ACGCCGAGAA CATCGGCGTC
ATGGCGGCCA CCCGGGTCTA CTCCACGGCG GCCTACTTCG TCGCCGCGAT CGTGGCGATC
CTGCTGGGTC TGGTGCCCAA GTTCGGTCAG ATCGTCAACG CGACCCCGCC GGCCGTGCTC
GGCGGCATCA CGCTCGTCCT CTACGGCATG ATCGGCCTGC TCGGCGCCAA GATCTGGAAG
GAGAACGGCG TCGACTTCGC CAAGCCCATC AACCTGGTCC CGGTCGCCGC CGGCATCATC
CTCGCGATCG GCAACGCCGA CCTGAAGATC ACCGACGACT TCCACCTGAC CGGCATCGCG
CTCGGCACTC TCGTGGTCGT CCTCGGCTAT CACCTCGCGC GGGTGGTCGC CCCCAAGGAC
CTCGACGACG GCACGATGAT CGCCGTCGGC CACGAGGGCG TGCACGCCGA GGACCACGCG
GCACCGCACG ACCACCACCA CTGA
|
|---|
| Protein sequence | MSMFKWELVD PKPGEAVAPH QRLSWGKTVG LGAQHVVAMF GATFVFPLIM GLNANLAIMM
SGIATICFLL IVQGKVPSYL GTSASFVGAA AAIYAYQGGD GPGGPADVTG AILVAGIVLA
IVGVIVHYLG ADSVNAVLPP VVTGAVVMLI GFNLAPVATL TYMPSDPWVA LITMTAVILM
AVGLRGFFGR IAVFLGLIFG YLLSVVWDWI FGQSTLPLPG NPEPGPHDRV NWDAVKNADW
FGFPVHTKDG LVGNQAFTDG YANVGWHMPS FSIAFILLAL PAVIALVAEN IGHVKAVAEM
TKTDLDPVMG RAIAADGVGT VIASTVGGSP TTTYAENIGV MAATRVYSTA AYFVAAIVAI
LLGLVPKFGQ IVNATPPAVL GGITLVLYGM IGLLGAKIWK ENGVDFAKPI NLVPVAAGII
LAIGNADLKI TDDFHLTGIA LGTLVVVLGY HLARVVAPKD LDDGTMIAVG HEGVHAEDHA
APHDHHH
|
|---|
| |