Gene Noca_1461 details

Gene Information

• Locus tag: Noca_1461
• ID: 4597229
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nocardioides sp. JS614
• Kingdom: Bacteria
• Replicon accession: NC_008699
• Strand: +
• Start bp: 1548303
• End bp: 1550264
• Gene Length: 1962 bp
• Protein Length: 653 aa
• Translation table: 11
• GC content: 72%
• IMG OID: 639776059
• Product: TrkA domain-containing protein
• Protein accession: YP_922662
• Protein GI: 119715697
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG0569] K+ transport systems, NAD-binding component

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGCGCA CCGGGCAGCA GCTGCGGCAG CGGACGGCGA AGGCGATGGC CCAGTCGCAG 
GGCCCGAGCG GCCCGGGGCC GACGCGGGCG ACGAGCGCGC CACGCTCGGG CTGGGGCGAC 
CGGCTCCGCT ACGGCTTCGA CAACAGCATG TCGCGGGGCA CGCCGGCGCT GATCATGTGG 
CTGTGCGTCG CCACCCTGGC GCTGATCGTG GTGTTCACGG TCCTCGTCAC GGTGCTCAGC 
CTGCGCGGGG GCGGCGAAGG CAGCTTCTTC CGGGAGCTGA TCCAGAGCCT GTTCCACGCC 
CTCGACCCGG GCACCGTCGC GGGTGACGGC GACACCCCCT GGCGGTTCCT GCTGACGATG 
CTGCTGCTGA CGATCGGCGG CCTGTTCATC GTCAGCGCGC TGATCGGCGT GATCGCCGCC 
GGCATCGACA CCAAGCTCGC GGAGCTGCGC CGTGGCCGCT CCATCGTGCT CGAGCGCGAC 
CACACGGTCA TCCTCGGCTG GTCGGACTCG ATCTTCACGA TCGTGCGCGA GCTGACCATC 
GCCAACGAGA GCCGCCGCAA GCCGGTGATC GTCATCCTCG CCGACCGCGA CAAGGTGGAG 
ATGGAGGAGG ACCTGCGCGC CAAGGTCGGC GACCTTCGCG GCACCCGCGT GATCTGCCGA 
TCCGGCTCGC CGATGGACCT CGACGACCTG GCGCTGAGCA GCCACCCGAC CGCGCGCTCG 
GTGATCCTGC TCGCCCCGGA GGACTCCGAC GACCCCGACA GTGAGGTCAT CAAGTCGCTG 
CTGGCCCTGA CCCACGCCGG CGCGGACGGC CCGCGCATCG TCGCGGAGAT CCGCAACCCG 
ACCAACCTCG AGGCGGCCCG TCTGGTCGGA GCCGACCGAA CCGTGCTCCT CGACATCCGC 
GAGACCGTGG CCAAGCTGGT CGTCCAGACC TCCCGGCAGT CGGGCGCCGC GGCCGTCTAC 
ACCGAGCTGT TCGACTACGA CGGCGACGAG ATCTACTTCC TCGAGGACCA CCGGCTCGAC 
GGCGCGACGT ACGCCGACGC GCAGCTCGCG TTCGAGCGCG CCTCGGTGAT CGGGCTGATC 
GCGGACGGCG TGCCGACGCT GAACCCGCCT CCCGAGACCC GCGTCGCCGG GCACACGCTG 
ATCGTGGTCG CCGAGGACGA CTCCACCCTG CGGGGGGAGC CGGATGCCGC CAGCCGCCCC 
GACCTCGACC TCCTCGGCAC CGTCGCCGCC GACGAGGAGC ACCCGACCCA GGCCCTGCTG 
ATCGGCTGGA ACGAGCGGGC GCCCATCGTC GTGCGCGAGC TCGACCACTA CGCCCCGCCC 
GGCTCGACGC TGACCGTGCT GACGTCGTAC GCCGTGCCGA CCGTGCCCGG CCTCCGCAAC 
CTCGCTGTCA CGGTCGCACC CGGGCCGACC ACCGACCGCG CCACGCTGGA GGAGCACGTC 
GTCGAGGGGC TCGACCAGGT CATCGTGCTG TGCTACTCCG ACGACCTCGC CCCGCAGGCC 
GCCGACGCGC GCACCCTGGT CACGCTGCTG CACGTGCGCG ACATCCTGTC CCGGTTCGAC 
GCCGCGACGC CGGTGGTCAG CGAGATGCTC GACGACCGGA ACCGGGTGCT CGCGCAGGTC 
GCGCACGTCG ACGACGTGGT CGTCAGCGGC GAGATCGTGA GCCTGCTGGT CACCCAGCTC 
TCCGAGGATC CGCGCCTGGA GCTGGTCTTC GGCCAGTTGC TCGGCAACGA GGGCAGCGAG 
ATCTACCTGC GGCCCGCGGA GTGGTACGTC GCGCCGGGCG CCGAGGTCTC CTTCGCCACG 
ATCGTCGCGG GCGCGACGCG CCGCAACGAG ACCGCGATCG GCTACAAGTC GGTGGCCCTG 
GCCGATGCCG ACGCGTCGTT CGGGGTGCGG GTGAACCCGG CGAAGTCCGA GACGTTCCAG 
GTCCTGCCGG GCGACCGGGT CGTCGTGCTC GCCGACGACT GA 

 

Protein sequence

MARTGQQLRQ RTAKAMAQSQ GPSGPGPTRA TSAPRSGWGD RLRYGFDNSM SRGTPALIMW 
LCVATLALIV VFTVLVTVLS LRGGGEGSFF RELIQSLFHA LDPGTVAGDG DTPWRFLLTM 
LLLTIGGLFI VSALIGVIAA GIDTKLAELR RGRSIVLERD HTVILGWSDS IFTIVRELTI 
ANESRRKPVI VILADRDKVE MEEDLRAKVG DLRGTRVICR SGSPMDLDDL ALSSHPTARS 
VILLAPEDSD DPDSEVIKSL LALTHAGADG PRIVAEIRNP TNLEAARLVG ADRTVLLDIR 
ETVAKLVVQT SRQSGAAAVY TELFDYDGDE IYFLEDHRLD GATYADAQLA FERASVIGLI 
ADGVPTLNPP PETRVAGHTL IVVAEDDSTL RGEPDAASRP DLDLLGTVAA DEEHPTQALL 
IGWNERAPIV VRELDHYAPP GSTLTVLTSY AVPTVPGLRN LAVTVAPGPT TDRATLEEHV 
VEGLDQVIVL CYSDDLAPQA ADARTLVTLL HVRDILSRFD AATPVVSEML DDRNRVLAQV 
AHVDDVVVSG EIVSLLVTQL SEDPRLELVF GQLLGNEGSE IYLRPAEWYV APGAEVSFAT 
IVAGATRRNE TAIGYKSVAL ADADASFGVR VNPAKSETFQ VLPGDRVVVL ADD