Gene Noca_1415 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_1415 
Symbol 
ID4597322 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp1498484 
End bp1499644 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content71% 
IMG OID639776013 
Productalanine racemase domain-containing protein 
Protein accessionYP_922616 
Protein GI119715651 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3616] Predicted amino acid aldolase or racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACTATCA ACCTTCGTCC CCCGCACTTC CGGGATCCGA TGGCGCTGGA CCCCAGCGCC 
GAGCTGCCCC TCCCGATCGA CAGCGAGCTC CTCGACACAC CCTCGATCCT GGTCGACCTC
GACCAGGTCG AGCGCAACAT CGCCTCGATG GCCAGCCTCG CCAAACGGCG CGGGATGACG
CTGCGGCCGC ACGCGAAGAG CCACAAGAGC ACCTTCATCG CCGACCTCCA GCTCGACGCT
GGTGCGACCG GCCTGTGCCT GGCCACTGCC GGTGAGGCCG AGGTGATGTG GCGCCACGGC
GTGGCGGACC TCCTCCTGGC CTACCCGGTG CTCGGCCGGG CCAAGCTCGA CCGGCTCGCG
CCGATCGTCG AGGCCGGCTC GCTGACGATG GTCGCCGACT CGGTCGAGGT CGCCAGCGGC
TACAGCGACC TGGCCTGCCG GACCGGTCGC GAGATCGCGG TGCTGATCGA GATCGACTCG
GGGATGAGGC GAGCGGGGGT CCCCCCCGAG CAGGCCGGAG CCGTGGCCGT CGAGGTCGAC
CGCCTTCCTG GTCTGCGGGT CCGCGGCATC CTGACCCACG CGGGCCACTC CCACGCGGCC
CTCGACCAGC GTGGGATCGA GGAGGTGGCG CGCGACGAGG TGCGCGCCAT GCAGCAGGCG
CGCGAGACGG TCGAGCGCGC GGGTGTCACG GTGGAGGTCG TCAGCGCGGG GTCGACGATC
ACGACGCCAT ACCTGTCCTC GGACGACGGC ATCACCGAGG TGCGACCGGG GACGTACGTC
TACAACGACC TGCGCACCCT GAGCCGGTAT GCGTGCACCC CCGACCAGCT GGCGGTCACG
ATGCTCGCCA CGGTGGTCAG CCGTGGCCCG GCCCGGGCCA CCTTGAACGC CGGGAGCAAG
AGCATCACCA CCGCGTCCAC CGTGCAGCAC GGTCACGGTC ACCTCGTCAA CCGGCCGCGC
AGCGGGTTCG CCCTCCTCTC CGAGGAGCAC GGGGTGTTGG AGCTCGCGAC CGAGGACGAC
GACCTCCGTG TCGGCGACCG GGTCCAGATC CTGCCTATCC ACGTCTGTGT CTGGATGGAC
CTGCAACCCG AGGTGTACGG CACCCGCGGC GGGCAGGTCG TCCAGCGAAT CCGCGTCGAC
GCCATGCGTC GCAGCCTCTG A
 
Protein sequence
MTINLRPPHF RDPMALDPSA ELPLPIDSEL LDTPSILVDL DQVERNIASM ASLAKRRGMT 
LRPHAKSHKS TFIADLQLDA GATGLCLATA GEAEVMWRHG VADLLLAYPV LGRAKLDRLA
PIVEAGSLTM VADSVEVASG YSDLACRTGR EIAVLIEIDS GMRRAGVPPE QAGAVAVEVD
RLPGLRVRGI LTHAGHSHAA LDQRGIEEVA RDEVRAMQQA RETVERAGVT VEVVSAGSTI
TTPYLSSDDG ITEVRPGTYV YNDLRTLSRY ACTPDQLAVT MLATVVSRGP ARATLNAGSK
SITTASTVQH GHGHLVNRPR SGFALLSEEH GVLELATEDD DLRVGDRVQI LPIHVCVWMD
LQPEVYGTRG GQVVQRIRVD AMRRSL