Gene Noca_1401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_1401 
Symbol 
ID4595874 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp1479722 
End bp1480909 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content66% 
IMG OID639775999 
ProductUDP-galactopyranose mutase 
Protein accessionYP_922602 
Protein GI119715637 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0562] UDP-galactopyranose mutase 
TIGRFAM ID[TIGR00031] UDP-galactopyranose mutase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCCACCT CTGCTCCAGA CCTCGTCGTC GTCGGCTCGG GCTTCTTCGG CCTCACGATC 
GCCGAGCGCT GCGCCAACGA GCTGGGCCTC CACGTGCTCG TCCTCGAGCG TCGCCACCAC
CTCGGTGGCA ACGCGTACTC CGAACGCGAG CCCGAGACCG GCATCGAGGT GCACAAGTAC
GGCGCGCACC TGTTCCACAC CTCCAACGAG AAGGTGTGGG AGTACGTCAA CCGGTTCACC
ACCTTCACCG ACTACAAGCA CCGGGTGTTC GGCAAGTACC AGGGGCAGGT CTACTCCCTG
CCGATGAACC TGGGCCTGAT CAACCAGTTC TTCGGCAAGA GCCACACCCC GCAGGAGGCT
CGCGAGCTGA TCGCGGGCCA GGCCAGCGAG ATCGACACCG CGGCCGCCCA GAACCTCGAG
GAGAAGGCGA TCAGCCTGAT CGGCCGGCCG CTCTACGAGG CGTTCATCAA GGGCTACACC
GCCAAGCAGT GGCAGACCGA CCCCAAGGAG CTCAGCGCGG ACATCATCAC GCGCCTGCCG
GTCCGCTACA CCTTCGAGAA CGGCTGGTTC AGCGACACCC ACGAAGGCCT GCCGACCGAC
GGCTACACCG CCTGGCTCGA GCGGATGGCC GACCACCCGA ACATCGAGGT GCGCCTCGAG
ACCGACTTCT TCGACGTGGT GGACGAGTTC AAGGGCAAGG TCCCGATCGT CTACACCGGT
CCGGTCGACG AGTACTTCGG CAACTCCGAG GGCCGGCTCT CCTGGCGCAC CGTCGACCTG
GAGGAGTCGG TCGAGGACGT CGACGACTTC CAGGGCACCG GCGTCGTCAA CTACAACGAC
CAGGACGTGC CGTTCACCCG GATCATCGAG TTCAAGCACT TCCACCCCGA GCGGGCCAAG
ACGCACCTGC CGGGCAAGAC CGTCATCGTC CACGAGTACT CCCGCTTCGC GGAGGAGGGG
GACGAGCCGT ACTACCCGAT CAACACCGCC GAGGACCGCG CGAAGCTGCT TCGCTACCGC
GAGCTGGCGA AGAAGGAGCC GATGGTGCTC TTCGGCGGTC GCCTCGGCAC CTACAAGTAC
CTCGACATGC ACATGGCCAT CGGCTCGGCC CTCTCCATGT TCGAGAACAA GCTCCGGCCG
CACTTCGCCG AAGGCGCGCC CCTCGCCAGC GGAGGTGTCG ACGAGTGA
 
Protein sequence
MATSAPDLVV VGSGFFGLTI AERCANELGL HVLVLERRHH LGGNAYSERE PETGIEVHKY 
GAHLFHTSNE KVWEYVNRFT TFTDYKHRVF GKYQGQVYSL PMNLGLINQF FGKSHTPQEA
RELIAGQASE IDTAAAQNLE EKAISLIGRP LYEAFIKGYT AKQWQTDPKE LSADIITRLP
VRYTFENGWF SDTHEGLPTD GYTAWLERMA DHPNIEVRLE TDFFDVVDEF KGKVPIVYTG
PVDEYFGNSE GRLSWRTVDL EESVEDVDDF QGTGVVNYND QDVPFTRIIE FKHFHPERAK
THLPGKTVIV HEYSRFAEEG DEPYYPINTA EDRAKLLRYR ELAKKEPMVL FGGRLGTYKY
LDMHMAIGSA LSMFENKLRP HFAEGAPLAS GGVDE