Gene Noca_1314 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_1314 
Symbol 
ID4598552 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp1386839 
End bp1387849 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content74% 
IMG OID639775908 
Producttype I phosphodiesterase/nucleotide pyrophosphatase 
Protein accessionYP_922515 
Protein GI119715550 
COG category[R] General function prediction only 
COG ID[COG1524] Uncharacterized proteins of the AP superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.342243 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTCTGC CCCGTGCCCT CGTCGCGGCG ACCCTTTCCG TGGCGACGTC CCTCGCGCTC 
GCCGGGTGCG CGGCCGGCGA CCGACCAGCC GCGGACGCGC GGCTCTCCGC CGCGCCGGCC
ACGGCCACGC AGGTGGTGGC GATCTCGGTC GACGGGCTCA ACACCGAGGC CCTCGACCGG
CTCGGGGCGG ACGGCGCCCC CACGCTCCAC CGGCTGCTCG CGGAGGGCGC CGGCACCCTC
AACGCGCGCA CCGAGTACGA GCAGACCGTC ACCCTGCCCA ACCACGCGAG CATGATGACC
GGCCGGCGGA TCGCCGCCGG CAAGGGCGGT CACGGCGTCA CCTGGGACGA CGACCGGCCC
GACTCCACGG TGCAGCAGGC CGCCGGGCAC GGCGTCGCCT CGATCTTCAC CACCGTGCAC
GCCGCCGGCG GCAGCACCGC GCTCTACACG ACCAAGTCGA AGTTCCGCCT CTACGACCGG
TCCTGGCCCC GCGGCATCGA CACCTTCCGG GTGCGGGAGA ACCAGCGGCG GCTGGTACGC
CTGGCCCGGG TCGACCTGGC CGACGGGCCG CCGACGTTCA CCTTCCTGCA CGTCTCCCTG
CCCGACCGCT TCGGGCACCG CTACGGCGGC ATGTCGCGGC AGTACCTCGC CGCCGTCCAG
CGCACCGATG CCCAGCTGGG CACCCTGCTG CGCACGCTCG CCGGCACCGA CGCGGTCCTG
GTCCTGACCG CCGACCACGG GTTCGTCACC GGCAGGACCG ACCACTCCGG ACGCCGGAAC
ATCGAGAACT ACCGGATCCC GTTCCTCGCC TGGGGTCCGG GCGTCGACAG GGGCGACCTC
TATGCGATGA ACCCCGACTT CGCCGATCCC GGCACGAGCA GGCCGTCGTA CGCCGGAGGG
CAGCCGGTGC GCAACGGCGA CCTGGCCAAC CTCGCGGCCG GCCTGCTCGG ACTCGACGCC
GTCCCCGGCA GCGGGCTGGA CGCGGACCAG TCGCTCGGCG TCACCGACTG A
 
Protein sequence
MLLPRALVAA TLSVATSLAL AGCAAGDRPA ADARLSAAPA TATQVVAISV DGLNTEALDR 
LGADGAPTLH RLLAEGAGTL NARTEYEQTV TLPNHASMMT GRRIAAGKGG HGVTWDDDRP
DSTVQQAAGH GVASIFTTVH AAGGSTALYT TKSKFRLYDR SWPRGIDTFR VRENQRRLVR
LARVDLADGP PTFTFLHVSL PDRFGHRYGG MSRQYLAAVQ RTDAQLGTLL RTLAGTDAVL
VLTADHGFVT GRTDHSGRRN IENYRIPFLA WGPGVDRGDL YAMNPDFADP GTSRPSYAGG
QPVRNGDLAN LAAGLLGLDA VPGSGLDADQ SLGVTD