Gene Noca_1313 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_1313 
Symbol 
ID4598551 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand- 
Start bp1386030 
End bp1386758 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content71% 
IMG OID639775907 
ProductPAS sensor protein 
Protein accessionYP_922514 
Protein GI119715549 
COG category 
COG ID 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGCAG ACGCAGCGGA CCCGGTCAGC GGCGCGCTGG CCGCTGCGGC CGCCGCCCGC 
CGCGCCGCGG AGGAGGAGCT CGAGCTGCTC CGCCAACGCA TGGACAACGC CCAGGCGCTC 
GCGAACATGG GCGACTACGA CTGGCACATC CCCACCGACA CCAACCGGTG GAGCGACCAA 
CTGTTCCGCA TCTACGGGCA CGAGCCGCAG TCGTTCAACG CGAGCTACGA GCGCTTCCTG 
TCCCTGATCC ATCCCGAGGA CCGGGAGCGG ATCCAGGCCA TCCACCAGCA CGCCTACGCC 
ACCGGCGAGC CGTACGAGAT GATCGAGCGC GTGGTGCGCC CCGACGGCGA GGTGCGGTAC 
CTGCACTCCA ACGGCCAGGT GATCATGGGT CCCGACGGGA GTCCCGAGCG GATGCGGGGC 
ACGTGCGTGG ACGTCACCGA GCAGGTGCTC GCCGAGCGCG AGCGCGAGGC CGCGGCGACC 
CACCTGAGCG AGGTGCGGCT GCGCCGCCGG CAGGCGGCCG AGATCAACGA CAACGTCGTG 
CAGGGCCTCA CCGCAGCGAT GTACTCACTC GAGCTGGGCG ACGCCGCGGG CTGCCAGGCC 
TACCTCGACC GGACGCTCGC CTCGGCGCGG ACGATGATGC ACGACCTGAT CGATCCGCTC 
GCCGAGGGCG AGCTGGACGC CGGCGACCTG GTCCGGGCGG AGCCGGCGAC GCTGGACGGG 
ACCTCGTGA
 
Protein sequence
MEADAADPVS GALAAAAAAR RAAEEELELL RQRMDNAQAL ANMGDYDWHI PTDTNRWSDQ 
LFRIYGHEPQ SFNASYERFL SLIHPEDRER IQAIHQHAYA TGEPYEMIER VVRPDGEVRY 
LHSNGQVIMG PDGSPERMRG TCVDVTEQVL AEREREAAAT HLSEVRLRRR QAAEINDNVV 
QGLTAAMYSL ELGDAAGCQA YLDRTLASAR TMMHDLIDPL AEGELDAGDL VRAEPATLDG 
TS