Gene Noca_1267 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_1267 
Symbol 
ID4599263 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp1341192 
End bp1343129 
Gene Length1938 bp 
Protein Length645 aa 
Translation table11 
GC content75% 
IMG OID639775861 
Productalpha amylase, catalytic region 
Protein accessionYP_922468 
Protein GI119715503 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0366] Glycosidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGGGGA TGAGCGCTCC CGCCGACGTC CAGGCCGCAG CCGCCGCCCT CCTGGGCGGG 
CTGGGCGCCG AGCGCCGCGA GTCCTTCGCG CTGCGACTGG ACCGCTGGTG GCCGGACCTG
CGCGCCGCCG TCGTCGAGCT GTACGACGAC CCCGATGCGG TGGCCCGTCG TCTCGTAGCG
GTCGCCGCCG CGGGCCACGC GGCCCGCTCG GAGGACCTGC ACCGGCTCGA CGAGCGCCGG
CTGCTGGAGC CGGACTGGCT GCAGCACCCG CGGATGTTCG GCTACGCCTG CTACACCGAG
CGCTTCGGGG GTGACCTGGC CGGGCTGCGC GACCGGCTCG ACCACCTCGA GGACCTCGGC
GTCACCTACC TGCACCTGAT GCCGCTGCTG CAGCCCCGGG AGGGCGACAA CGACGGCGGC
TACGCCGTCG CCGACTACCG CACGGTCCGC CCGGACCTCG GCACCACCGC CGACCTCGCC
GACCTCGCGG GGGTCCTCCG CGCCCGCGGG ATCAGCCTCG TGGTCGACCT GGTGCTCAAC
CACGTCGCGC GCGAGCACGA ATGGGCGGAG CGCGCTCGGG CCGGGGAGCC GGCGTACCTC
GCGTACTTCC ACCACTACCC CGACCGCGAG CTGCCCGACG CCTACGAGGC GACCCTGCCC
GAGGTGTTCC CGGACTTCGC GCCCGGCAAC TTCAGCTGGG ACGACGACCT GGGCGCCTGG
GTGTGGACGA CGTTCAACGC GTGGCAGTGG GACCTCGACT GGGCCAACCC CGCGGTGCTC
GAGGAGTTCG CCGACATCGT CGTGACGCTC GCCAACCTGG GCGTCGAGGT GCTCCGCCTC
GATGCCATCG CGTTCCTGTG GAAGCGGCTC GGCAGCACCT GCCAGAACGA GCCGGAGGTG
CACGCGATCA CCCAGGCGCT GCGCGCCGTC GCGCGGCTCG CGGCGCCGGC GGTGGCGTTC
AAGGCCGAGG CGATCGTCGG CCCCCGCGAC CTCGTGCAGT ACCTCGGCCT CGGCGCGCAC
GCCGGGCGGG TCAGCGACCT GGCCTACCAC AACAGCCTGA TGGTGCAGGT CTGGTCGATG
CTCGCCACGC AGAGCACGAC GCTGGCCCGG CACGCGCTGG CCGCGCTGCC GTCGGCGCCC
GCCACCTCGA CCTGGATCAC CTATGCCCGT TGCCACGACG ACATCGGCTG GGCCATCGAC
GACGGCGACG CGGCGGCCGT CGGCCTCGAC GGCCCGGCGC ACCGGCGCTT CCTCGCCGAC
TGGTACGCCG GTGACTTCCC GGGCTCCTGG GCCGACGGGC TGGTCTTCCA GCACAACCCG
GAGACCGGCG ACAAGCGGAT CAGCGGTACG GCGGCCTCGC TGGCCGGGCT GTCCGAGGAC
ACCGACGCCG GGCTCGCGCG GATCTTCCTC GCCCACGCGA TCGTCGCCGG CTGGGGCGGG
ATCCCCGTGG TGTGGAGCGG CGACGAGCTC GGCCAGCCCA ACGACCCGGA CTGGGCGACC
GAGCCCGGCC ACGAGGACGA CAACCGATGG GCGCACCGGC CCCGGCTGGA CGGCCGGCTC
GCCGCACAGC GCCACGACCT GCGCACGGTC CCGGGCCGGG TCTTCAGCGG GCTCGCCCAC
CTGTCCCGGG TCCGGGCCGG CCTGCCGCAG CTGCACGCCT CCGCGGCCAG CGAGGTCCTC
CTCGACACCG ACGAGGGCGT GCTCGCGTGC GCGCGGCGGC ACCCGAGCGG CGCGATGGTG
ACCCTCTACA ACGTCACGAC CACGCCGCGG CCGTTCCCGA TCCACCGGCT GGCGGAGTGC
GGCATCGGTG CGCCGTACGA CGCGCTCGGC GGGCACCCGA TCACCGCGGG CGCGGACGGC
CAGGCCTGGC TGCCGCCGTA CGCCGCCTGG TGGGTGGTCG ACAGCACAGG TCCCCAGACA
CGTCCCCGGA AGCATTAG
 
Protein sequence
MRGMSAPADV QAAAAALLGG LGAERRESFA LRLDRWWPDL RAAVVELYDD PDAVARRLVA 
VAAAGHAARS EDLHRLDERR LLEPDWLQHP RMFGYACYTE RFGGDLAGLR DRLDHLEDLG
VTYLHLMPLL QPREGDNDGG YAVADYRTVR PDLGTTADLA DLAGVLRARG ISLVVDLVLN
HVAREHEWAE RARAGEPAYL AYFHHYPDRE LPDAYEATLP EVFPDFAPGN FSWDDDLGAW
VWTTFNAWQW DLDWANPAVL EEFADIVVTL ANLGVEVLRL DAIAFLWKRL GSTCQNEPEV
HAITQALRAV ARLAAPAVAF KAEAIVGPRD LVQYLGLGAH AGRVSDLAYH NSLMVQVWSM
LATQSTTLAR HALAALPSAP ATSTWITYAR CHDDIGWAID DGDAAAVGLD GPAHRRFLAD
WYAGDFPGSW ADGLVFQHNP ETGDKRISGT AASLAGLSED TDAGLARIFL AHAIVAGWGG
IPVVWSGDEL GQPNDPDWAT EPGHEDDNRW AHRPRLDGRL AAQRHDLRTV PGRVFSGLAH
LSRVRAGLPQ LHASAASEVL LDTDEGVLAC ARRHPSGAMV TLYNVTTTPR PFPIHRLAEC
GIGAPYDALG GHPITAGADG QAWLPPYAAW WVVDSTGPQT RPRKH