| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_1253 |
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| Symbol | |
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| ID | 4599249 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 1329030 |
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| End bp | 1329884 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 639775847 |
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| Product | type II secretion system protein |
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| Protein accession | YP_922454 |
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| Protein GI | 119715489 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4965] Flp pilus assembly protein TadB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.454423 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCGCGC TCGTCGGACT GGGGGTGGGC GTCGGGCTGA TGCTGGTCTG GAGCGCGTTC
GCCCTGCCCC GCGGGACCCG CGCGACGTCC TCGCGCCGCG GTCGGGCCGC CGGGCTGTTG
GCGCGGGCGG GCCTCGGGCA GGTCTCGGTC ACCGGTTTCG TCGTGCTCTG CGTCGGGTGC
GGTGTCGTCA CGACAGTCGT GCTCCAAGCG GTCTCCGGCA CCCCGCCGGT CGCGCTCGCG
TTCGGACTGA TGGGTGCCTG GGCGCCGGTC GGGATCGTCT CCGGCCGGGC CCGGCGACGT
CAGCGTGAGC TCGCCGAGGT GTGGCCCGAA GCCGTGGACA ACCTGACCTC AGCGGTGCGC
GCAGGCATGT CACTGCCCGA CGCCCTGGCC GGGCTCGGCT CCCGCGGCCC GGAGCCGTTG
CGCGACGCGT TCGACCAGTT CGCGCTCGAC TACCAGGTCA CCGGGCGGTT CGGCGAGTGC
CTGGACCGGC TCAAGGAGCG GCTGGCCGAC CCGGTCGGTG ACCGGGTGGT GGAGGGTCTG
CGGATCGCTC GTGAGGTCGG TGGCGGCGAG CTCGGCCGGC TGCTGCGCAA CCTCTCGTCG
TACCTGCGCG ACGACGCCCG CACCCGCTCG GAGCTCGAGG CACGGCAGGC CTGGACCGTG
AACGGCGCCC GCCTGGCCGT GGCGTCCCCG TGGCTGGTGC TGCTCTTCAT GTCCTTCCAG
TCCGAGGTGA TCCACCGGTA CGCCTCGCCG GGAGGCGTCC TGGTGCTCGC CGTCGGTGCG
GGCGCCTGTG TGGTCGCGTA CCGCCTGATG ATGCGCATCG GGCGGCTCCC CACCGAGCGG
CGGATCCTGT CATGA
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| Protein sequence | MGALVGLGVG VGLMLVWSAF ALPRGTRATS SRRGRAAGLL ARAGLGQVSV TGFVVLCVGC
GVVTTVVLQA VSGTPPVALA FGLMGAWAPV GIVSGRARRR QRELAEVWPE AVDNLTSAVR
AGMSLPDALA GLGSRGPEPL RDAFDQFALD YQVTGRFGEC LDRLKERLAD PVGDRVVEGL
RIAREVGGGE LGRLLRNLSS YLRDDARTRS ELEARQAWTV NGARLAVASP WLVLLFMSFQ
SEVIHRYASP GGVLVLAVGA GACVVAYRLM MRIGRLPTER RILS
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