| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_1241 |
|---|
| Symbol | |
|---|
| ID | 4599237 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | + |
|---|
| Start bp | 1316389 |
|---|
| End bp | 1317603 |
|---|
| Gene Length | 1215 bp |
|---|
| Protein Length | 404 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 639775835 |
|---|
| Product | histidine kinase |
|---|
| Protein accession | YP_922442 |
|---|
| Protein GI | 119715477 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.948889 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTGAAC GCCTGACGAT CGCCTTCGTC GTCCTCACCA TCGTCCTGCT CCTCGGCGCC
GGCGCGGTGC GGACGTTCGT GCTGCGCGAC CTGATCCAGG AGCAGGAGGC CGGCCACCTG
CGCCAGGAGG TCGAGCTGAT CGGTGCGATC ATCGACGACC GGGAGGCGGC CGGTGGGGCG
ATCGACGACC GGTTCCTGAC GACGCTGGTC AGCCCGGACC GCCGCCTCGA GTACGACCCC
GAGAACGGCC CGGCGGTCGT GGTCCGCGGC CCCGACTACA CCGGAACCGA CGACCCCCAG
GACGACCTCG CCGCGGTCCT CGCGGTCCGT GGAGCCCGGG TCACGGTGAG CCAGTCGCCG
CAGGTGGCCA GTGACATCGT CGGGCGCGAC ACCGGGTCGA TCGCGGCGCT GTTCGTCCTG
ATCGCGGTGG TCGCCGGCAT CGCCGGCTTC CTGATCGCCT CCGCGCTCTC CTCGCCGTTC
CAGCGGCTGG CCGTCGCGGC CGCGGCCCTC GGCCGCGGCC GGTTCGACCT CGAGCTGCCG
CGCACCCGGA TCCCCGAGGC GCGGGCGATC TCGAACGCCC TGCGGGCCAG CGCGCACCAG
CTCGAGGACC GGGTGCACCG CGAGCGCGAC TTCGCCGAGC ACGCCTCGCA CGTGCTGCGC
ACCCCGCTGA CCGGGCTGCG GCTCGAGCTG GAGGACCTCA CGCTGCGCGA CGACGTGCCG
GCCGACGTGC AGGAGTCGGC GGCGCGCAGC CTGGCCGCGG TCGAGGAGGT CGGCGCGGTC
GCCGGCGAGC TGGTCGAGCT GACCCGGCGG GGCAGCCTGG TGGCGGGCTC CGAGCTGCCG
CTGGTCGACC TCGCGACCCA GCTGGCGCAG CGGTGGGCCG ACCGGCTCGG GGTGCGCACC
CGGTCGCTGA CCGCTGCCGC CGAGGGAGAG CTCTCGCTGA CCTACACACC CGGCCCGGTC
GAGCACGTCA CCGACCTGCT GCTGGCCGAC GTCGTCCGCC GCGGGAGCGG CCCGGTGCGC
ATCGTCTTCC ACGGCGAGGA GGCCGGCCAC CTGCGCATCC ACGTCGAGTG CGAGGGCCGC
GGACGGGAGG ACCACCACGG CGCCGAGCCC GTGGACCGGG TCGCGCAGGT CACCTCCGTG
GTCGAGGCGC TCGGCGGGCG GGTGACCGGG TCGCATCCCG CCGAGGGCAT CGAGGTCCTG
CTGCCCCGTC GCTGA
|
|---|
| Protein sequence | MRERLTIAFV VLTIVLLLGA GAVRTFVLRD LIQEQEAGHL RQEVELIGAI IDDREAAGGA
IDDRFLTTLV SPDRRLEYDP ENGPAVVVRG PDYTGTDDPQ DDLAAVLAVR GARVTVSQSP
QVASDIVGRD TGSIAALFVL IAVVAGIAGF LIASALSSPF QRLAVAAAAL GRGRFDLELP
RTRIPEARAI SNALRASAHQ LEDRVHRERD FAEHASHVLR TPLTGLRLEL EDLTLRDDVP
ADVQESAARS LAAVEEVGAV AGELVELTRR GSLVAGSELP LVDLATQLAQ RWADRLGVRT
RSLTAAAEGE LSLTYTPGPV EHVTDLLLAD VVRRGSGPVR IVFHGEEAGH LRIHVECEGR
GREDHHGAEP VDRVAQVTSV VEALGGRVTG SHPAEGIEVL LPRR
|
|---|
| |