| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_1226 |
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| Symbol | |
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| ID | 4599275 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 1301489 |
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| End bp | 1303276 |
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| Gene Length | 1788 bp |
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| Protein Length | 595 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639775820 |
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| Product | ABC transporter, transmembrane region |
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| Protein accession | YP_922427 |
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| Protein GI | 119715462 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.56473 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCGACC CTCTCGGCCC CTCGCCCGAC CAGGACCCAC CCGCCGGCGT GCACTCGCTC
TGGCGGCTGC GCGGGTACCT ACGCCCGCAC GCGCTGTCGA TGTCGATCAT GCTGCTCGCC
TCGCTCGGCG GGGTCGGGCT CTCGATCGCG ATCCCGCTGG TCACCAAGGC CCTCATCGAC
GGCCCGATCA CCCACCACGA GCTCCGCGGG CTGATCGGCC TCGGGCTGCT CGCGCTCGCC
CTCGGGGTGC TCGAGGCGGT GCTGGTGTGG TGGCGCCGCT GGGTCCAGTC GGCCACCGTG
CTCGACCTGG AGACGGCCCT GCGCGGCGAC CTCTACGACC ACCTCCAGCA GCTGCCGATG
AGCTTCCACA GCCGTTGGCA GTCCGGCCAG CTGCTCTCGC GGGCCACGAC CGACCTGTCC
GCGATCCGCC GGTTCAGCGG CTTCGGGCTG ATCTTCCTGA TCACCAACGT GCTGCAGCTG
GGCGTCGTGA CCGTCGTGCT GCTGGAGATG TACTGGCCGC TCGGCCTGGT CGTCGCCGCG
ACCGCGGCGC CGATCGTGTG GCTCTCGATG CGCTTCGAGC GGTCCTACGT GCTGGTCTCC
CGCCGGGTCC AGGACGAGCA GGGCGACCTC GCGACCCTGG CGGAGGAGGG CGCGGTCGGC
ATCCGCGTGA TCAAGTCCTT CGGGCGCAGC GAGCACGTGT CCGCGCAGTA CGAAGCCGCC
GCCCGCACCC TCCACGCGAC CAGCATGGAC AAGGTCCGCC TGTCGGCGAA GTTCTGGACC
TTCCTCGAGG TGATCCCCAA CCTGGCGGTG GTCGTGGTGC TGCTGCTCGG CTCGATCGGC
GTCGGCAAGG GCTACCTGAC CCCCGGCGAG CTGGTCGCGT TCATCACCCT GATGCTCTCG
CTGGTGTGGC CGGTCGCCTC CCTCGGCGTC ATCCTCGCGA TGGCCCAGGA GGCGATGACC
GCGGCCGCCC GGATCCTGGA GATCTTCGAC ACCGCACCGG CCATCGTGAC CGGCACCCGT
GAGATCGAGC GGCCCCGCGG CCACGTGCGC TTCGAGCACG TCGACTTCGC GTTCCCCGAC
GCGCCCGGTG AGCTGGTGCT GCGCGACGTC AACCTCGACA TCGCGCCGGG GGAGACCGTC
GCGCTGGTCG GCGCGACCGG GTCCGGCAAG ACCATCCTCA CGGCGCTCGT GCCGAGGCTG
TACGACGTCA CCGCCGGCCG GGTCACCATC GACGGCGTCG ACGTCCGCGA GCTGCGCCTG
AGCCACCTGC GCCAGCTCGT CGCGACCGCC TTCGAGGAGC CGACGCTGTT CTCGATGAGC
GCCCGGGAGA ACCTCACCCT GGGCCGCGCC GACGCCACCG AGGAGGAGAT CGAGTCCGCG
CTCGAGGTCA GCCAGGCCGG GTTCGCCCGG GACCTGCCGT GGGCCCTGGA CACCCGGATC
GGCGAGCAGG GGATGGCGCT GTCCGGCGGC CAGCGCCAGC GCCTCGCCCT GGCCCGGGCG
GTGCTCGCCC GTCCTCGGGT CCTCGTCCTC GACGACACAC TCTCGGCGCT CGACGTGCAC
ACCGAGCGGC TGGTCGAGGA GTCCCTGCGC CGGGTGCTCG CGGACACCAC CGGCCTGGTG
GTCGCCCACC GCGCCTCGAC GGTGCTGCTC GCCGACTGGG TGGCGTTGAT CCAGGACGGC
ACCGTCACCC ACGTCGGCGA TCACCGTGAG CTGCTCGCCA CCGTGCCGGC CTACCAGGAG
CTCCTGGCCG CCGAGGCCCT CGACGACACC GAGGGTGGTG CGGCATGA
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| Protein sequence | MRDPLGPSPD QDPPAGVHSL WRLRGYLRPH ALSMSIMLLA SLGGVGLSIA IPLVTKALID
GPITHHELRG LIGLGLLALA LGVLEAVLVW WRRWVQSATV LDLETALRGD LYDHLQQLPM
SFHSRWQSGQ LLSRATTDLS AIRRFSGFGL IFLITNVLQL GVVTVVLLEM YWPLGLVVAA
TAAPIVWLSM RFERSYVLVS RRVQDEQGDL ATLAEEGAVG IRVIKSFGRS EHVSAQYEAA
ARTLHATSMD KVRLSAKFWT FLEVIPNLAV VVVLLLGSIG VGKGYLTPGE LVAFITLMLS
LVWPVASLGV ILAMAQEAMT AAARILEIFD TAPAIVTGTR EIERPRGHVR FEHVDFAFPD
APGELVLRDV NLDIAPGETV ALVGATGSGK TILTALVPRL YDVTAGRVTI DGVDVRELRL
SHLRQLVATA FEEPTLFSMS ARENLTLGRA DATEEEIESA LEVSQAGFAR DLPWALDTRI
GEQGMALSGG QRQRLALARA VLARPRVLVL DDTLSALDVH TERLVEESLR RVLADTTGLV
VAHRASTVLL ADWVALIQDG TVTHVGDHRE LLATVPAYQE LLAAEALDDT EGGAA
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