| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_1200 |
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| Symbol | |
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| ID | 4599300 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 1275728 |
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| End bp | 1276792 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 639775794 |
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| Product | succinyl-diaminopimelate desuccinylase |
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| Protein accession | YP_922401 |
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| Protein GI | 119715436 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01900] succinyl-diaminopimelate desuccinylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACCGGA TCGACCTCAC GACCGACGTC GTCACGCTGA CCGAGCGGCT GGTCGACATC
GAGTCGGTCA GCCGCAACGA GCAGGCGATC GCGGACGCGG TCGAGACGGC GCTCGCGGCG
TACCCCCACC TGACCGTCAC CCGGCACGGC AACACCGTCG TCGCCCGCAC CGACCTCGGC
CGGCCCGAGC GGGTCGTGAT CGCCGGCCAC CTCGACACCG TGCCGGTCAA CGACAACCTC
CCCGCCCGCC GCGAGGGCGG GCTCCTGCAC GGCCTCGGGA CCTGCGACAT GAAGGGCGGC
GACGCGGTGA TCCTCCGGCT CGCCGCCACC GTCACCGAGC CCACCCGCGA CGTCACCTAC
CTGCTCTACG ACGCCGAGGA GGTCGAGGCC GAGCACAACG GCTTGCGGCT GCTCTCGCTG
AGCCACCCCG AGCTGCTGGC CGCCGACTTC GCGATCCTGA TGGAGCCGTC CAACGCCGGC
GTCGAGGCCG GCTGCCAGGG CACGCTGCGC GTCGACGTGC GCACCACCGG CGAGCGCGCC
CACTCCGCGC GCAGCTGGCG CGGCGTCAAC GCGATCCACC GGGCCGGCGA GGTGCTCCGC
CGCCTCGAGG GGTACGCCGC CAGGCGGCCG GTCATCGACG GGCTGGAGTA CCACGAGGGC
CTGAACGCGG TGGGCATCCG CGGCGGCGTG GCCGGCAACG TGGTCCCCGA CGAGTGCGTC
GTCGCGGTCA ACTACCGGTT CGCCCCCGAC CGCTCGGAGG CCGAGGCCGA GGCGTTCGTC
CGCGAGTTCT TCGCCGGCTT CGACGTCACC GTCACCGACT CGGCGCCCGG CGCGCTGCCC
GGGCTCGACC GGCCGGCCGC GAAGGCGTTC GTCGACGCCG TCGGCGGCGA GGTCAACCCG
AAGTTCGGGT GGACCGACGT GGCCAGGTTC ACCGGGCTCG GCATCCCGGC GGTGAACTAC
GGGCCGGGCG ACCCGGTGCT CGCGCACAAG CAGGAGGAGC ACGTGCCGAT CGAGCAGATC
GAGCGTTGCG AGACCCGGCT CCGGGCCTGG CTGGAAGGAC GCTGA
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| Protein sequence | MHRIDLTTDV VTLTERLVDI ESVSRNEQAI ADAVETALAA YPHLTVTRHG NTVVARTDLG
RPERVVIAGH LDTVPVNDNL PARREGGLLH GLGTCDMKGG DAVILRLAAT VTEPTRDVTY
LLYDAEEVEA EHNGLRLLSL SHPELLAADF AILMEPSNAG VEAGCQGTLR VDVRTTGERA
HSARSWRGVN AIHRAGEVLR RLEGYAARRP VIDGLEYHEG LNAVGIRGGV AGNVVPDECV
VAVNYRFAPD RSEAEAEAFV REFFAGFDVT VTDSAPGALP GLDRPAAKAF VDAVGGEVNP
KFGWTDVARF TGLGIPAVNY GPGDPVLAHK QEEHVPIEQI ERCETRLRAW LEGR
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