| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_1193 |
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| Symbol | |
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| ID | 4599293 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 1267033 |
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| End bp | 1267890 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 639775787 |
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| Product | N-succinyldiaminopimelate aminotransferase |
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| Protein accession | YP_922394 |
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| Protein GI | 119715429 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | [TIGR03539] succinyldiaminopimelate transaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACCTGCT TCGACACGGC GGACGGCACC GTGCTGCCGG TGATCGGCAC CAAGGAGCTG
ATCGCCTCGA TGCCGGTCCA CCTCGGCCTC GGCCCCGGTG ACCTGGTCGT CTACCCCGAG
CTGGCCTACC CGACGTACGA GGTCGGCGCG GCGCTCGCCG GCGCGCGCGC CCTCGCCAGG
GACTCGCTGA CCTCCCTCGG CCCGGAGCGG CCCGCGCTGC TCTGGCTGAA CTCCCCGTCG
AACCCGACCG GCCGGGTGCT GCCGCCCGAG CACCTGAAGA AGGTCGTCGA CTGGTGCCGC
GAGCGCGGCA CGATCCTGGT CTCCGATGAG TGCTACCTGG AGTGCGCCTG GGAGGACCGG
CCGGTCTCCG TGCTGCACCC GAAGGTCTCG GGCGGCTCCG CTGAGGGCAT CCTCGCAGTG
CACTCGCTCT CCAAGCGCTC CAACCTGGCG GGCTACCGGT GCGGCTTCGT GGCCGGCGAC
ACCGCACTCA TCGGGGAGCT GCTCGCGGTG CGCAAGAACC TCGGGCTGAT GCTGCCCGGC
CCGCAGCAGG TCGCGATGAA GGCCGCGCTC GACGACGACG CGCACGCCCT GGAGCAGCAC
GCCCGCTACG CCGCCCGCCG AGCCAAGCTG CGCGACGCAC TGCTCGGCGC CGGCTTCACC
ATCGAGCACT CCGAGGCGTC GCTGTACCTG TGGGCCACCC GCGACGAGGA CTGCTGGGAG
ACCGTGTCCT GGCTGGCCGA GCGCGGCGTC CTGGTCGCCC CGGGCGCGTT CTACGGCCGC
GCCGGCGGCC GCCACGTGCG GGTCGCCTTC ACCGCCACCG ACGAGCGGGT CGACGCCGCG
GTCGCCCGGC TGGCCTGA
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| Protein sequence | MTCFDTADGT VLPVIGTKEL IASMPVHLGL GPGDLVVYPE LAYPTYEVGA ALAGARALAR
DSLTSLGPER PALLWLNSPS NPTGRVLPPE HLKKVVDWCR ERGTILVSDE CYLECAWEDR
PVSVLHPKVS GGSAEGILAV HSLSKRSNLA GYRCGFVAGD TALIGELLAV RKNLGLMLPG
PQQVAMKAAL DDDAHALEQH ARYAARRAKL RDALLGAGFT IEHSEASLYL WATRDEDCWE
TVSWLAERGV LVAPGAFYGR AGGRHVRVAF TATDERVDAA VARLA
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