Gene Noca_1148 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_1148 
Symbol 
ID4599323 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp1218131 
End bp1218937 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content75% 
IMG OID639775744 
Producthypothetical protein 
Protein accessionYP_922351 
Protein GI119715386 
COG category[I] Lipid transport and metabolism 
COG ID[COG1946] Acyl-CoA thioesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.392348 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCTCCG AGTTCGATCG CCAGGTCGCC GTCACCCGTC AGGACGACAC GACGTACGCC 
GCCGATCTGG CCGCGGGCTG GGCCGTCGGC GGCGGGCTCA ACGGCGGCTA CCTGCTCGCC
GTGATCGGCA CCGCGCTGCG CCACGCGCTC CCGGACAAGC CCGACCCGGT CGCCGTGTCG
GCCTACTTCC TCTCCGCCTC CACCGCCGGA CCCGCCACCG TCAGCGTCGA CGTGCGCCGC
GACGGCGGCA CCCTCGCGAC CGCCGCAATC GACCTGCGGC AGGGCGACGA CGTGCGGATC
ACCGCGCTGG CGACGTACGG CGACCTGGGC CGGCTCGGCG ACGACGTCCG CACGACCGCG
GACGAGCCGG ACATGCCGCC CCCGGACCGG TGCGTGCCGA ACACGATGGC GCCACCGGAG
GTGCGCGCGA TCGCGCCGCT GATGGACCGC TTCGACATGC GCTTCCACCC CGACCACATC
GGGTGGGCCG TCGGCGAGCC GAGCGGCAAC GGCGTCCTGA GCGCGTGGTT CCGCCTGGCC
GACGGCAGGG AGCCGGACCC GGTCTCCCTC CTCCTGGTGG TGGACGCGCT GCCGCCGGTG
ACCTTCGACC TCGGGATGCC CGGGTGGGCG CCCACCCTCG AGCTCACCGC GCACGTGCGC
GCCCGGCCGG CGCCGGGCTG GCTCAAGGTG CGGCACGCCA CCCGCAACCT GGCGGGTGGG
ATGTTCGAGG AGGACTGCGA GGTCTGGGAC TCCGCCGGCC GGCTGGTCGC CCAGAGCCGC
CAGCTCGCCC GCCAGCCGCG GCCCTAG
 
Protein sequence
MSSEFDRQVA VTRQDDTTYA ADLAAGWAVG GGLNGGYLLA VIGTALRHAL PDKPDPVAVS 
AYFLSASTAG PATVSVDVRR DGGTLATAAI DLRQGDDVRI TALATYGDLG RLGDDVRTTA
DEPDMPPPDR CVPNTMAPPE VRAIAPLMDR FDMRFHPDHI GWAVGEPSGN GVLSAWFRLA
DGREPDPVSL LLVVDALPPV TFDLGMPGWA PTLELTAHVR ARPAPGWLKV RHATRNLAGG
MFEEDCEVWD SAGRLVAQSR QLARQPRP