Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_1148 |
Symbol | |
ID | 4599323 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | + |
Start bp | 1218131 |
End bp | 1218937 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 639775744 |
Product | hypothetical protein |
Protein accession | YP_922351 |
Protein GI | 119715386 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1946] Acyl-CoA thioesterase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.392348 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAGCTCCG AGTTCGATCG CCAGGTCGCC GTCACCCGTC AGGACGACAC GACGTACGCC GCCGATCTGG CCGCGGGCTG GGCCGTCGGC GGCGGGCTCA ACGGCGGCTA CCTGCTCGCC GTGATCGGCA CCGCGCTGCG CCACGCGCTC CCGGACAAGC CCGACCCGGT CGCCGTGTCG GCCTACTTCC TCTCCGCCTC CACCGCCGGA CCCGCCACCG TCAGCGTCGA CGTGCGCCGC GACGGCGGCA CCCTCGCGAC CGCCGCAATC GACCTGCGGC AGGGCGACGA CGTGCGGATC ACCGCGCTGG CGACGTACGG CGACCTGGGC CGGCTCGGCG ACGACGTCCG CACGACCGCG GACGAGCCGG ACATGCCGCC CCCGGACCGG TGCGTGCCGA ACACGATGGC GCCACCGGAG GTGCGCGCGA TCGCGCCGCT GATGGACCGC TTCGACATGC GCTTCCACCC CGACCACATC GGGTGGGCCG TCGGCGAGCC GAGCGGCAAC GGCGTCCTGA GCGCGTGGTT CCGCCTGGCC GACGGCAGGG AGCCGGACCC GGTCTCCCTC CTCCTGGTGG TGGACGCGCT GCCGCCGGTG ACCTTCGACC TCGGGATGCC CGGGTGGGCG CCCACCCTCG AGCTCACCGC GCACGTGCGC GCCCGGCCGG CGCCGGGCTG GCTCAAGGTG CGGCACGCCA CCCGCAACCT GGCGGGTGGG ATGTTCGAGG AGGACTGCGA GGTCTGGGAC TCCGCCGGCC GGCTGGTCGC CCAGAGCCGC CAGCTCGCCC GCCAGCCGCG GCCCTAG
|
Protein sequence | MSSEFDRQVA VTRQDDTTYA ADLAAGWAVG GGLNGGYLLA VIGTALRHAL PDKPDPVAVS AYFLSASTAG PATVSVDVRR DGGTLATAAI DLRQGDDVRI TALATYGDLG RLGDDVRTTA DEPDMPPPDR CVPNTMAPPE VRAIAPLMDR FDMRFHPDHI GWAVGEPSGN GVLSAWFRLA DGREPDPVSL LLVVDALPPV TFDLGMPGWA PTLELTAHVR ARPAPGWLKV RHATRNLAGG MFEEDCEVWD SAGRLVAQSR QLARQPRP
|
| |