| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_1130 |
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| Symbol | |
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| ID | 4599383 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | - |
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| Start bp | 1197616 |
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| End bp | 1198716 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639775726 |
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| Product | twitching motility protein |
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| Protein accession | YP_922333 |
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| Protein GI | 119715368 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.3933 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCGGATCG CGCCCTTCCT CCAGGCCGTC GTGGTCAACC GCGGCTCCGA CCTGCACGTG
AAGGTCGGCA GCCCGCCGCG GATCCGCATC TCGGGGTCGC TGGTCCCGCT GCAGGTGGAC
CCGCTGACCG CCGAGCAGGT CGAGGAGCTG GTCCGCGAGA CCATGCCCGC GGACGTCGAG
GCGCACTTCA GCGCCACCAA CGAGGCCGAC TACGCGCTCG CCGTCCCCGG CATCGGCCGG
TTCCGCGTCA ACGCGTTCCG GTCACGAGGG GCGGTCGGGT GCGTGTTGCG CCTGGTGGGC
GACGAGCCGC GCTCGCTGGC GGACCTGGCC CTGCCCGAGG TGATCCACCG CCTCGCCCTG
GAGCCGCGCG GCCTGGTGCT GGTCACCGGC CCGACCGGCT CGGGCAAGAC CACGACCCTG
GCGGCGATGG TCGACGCCAT CAACGAGGCC CGGCCCGTGC ACATCCTCAC CATCGAGGAC
CCGATCGAGG TGATCCACCG CGACAAGCTC GCGGCGGTCA ACCAGCGCGA GCTCGGCACC
GACACCGCCG ACTGGGCGGT GGCGCTGCGG GCCGCGATGC GGCAGGACCC GGACGTGATC
CTGATCGGCG AGATGCGCGA CCCCGACACC GTCCGGGCCG CGCTCGCGGC CGCCGAGACC
GGGCACTTCG TGATGTCGAC GCTGCACACC ACGGACGCCA AGGAGACGGT CAACCGGATC
ATCGACTTCT TCCCCCCGCA TGAGCAGAAG CAGGTACGCC TCGGGCTCGC CGGCTCGCTG
CGCGGCATCG TCTGCCAGCG GCTGGTGCCG CGCGCCGACG GCCAGGGCCG GGTCGTCGCG
ATGGAGGTCG CCGTGAACAC GCCGCGGCTC GCCGAGGCGG TCGCCGACCC GGACCGCACC
GACACGATCC CGGACATCGT CTCCGACGGC GCCTACTCCG GCATGCAGAC CTTCGACCAG
CACCTGGTCC GGTTGGTGCT CGACGGCTCG GTCTCGGTCC CCGACGCGAA GCTGGTCAGC
TCCAACACCC ACGACTTCTC GGTGATGCTG AAGCGCGCCG GGGTCGATCC GGCCCTGGTC
GACGCGGAGC CGCCCCGATG A
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| Protein sequence | MRIAPFLQAV VVNRGSDLHV KVGSPPRIRI SGSLVPLQVD PLTAEQVEEL VRETMPADVE
AHFSATNEAD YALAVPGIGR FRVNAFRSRG AVGCVLRLVG DEPRSLADLA LPEVIHRLAL
EPRGLVLVTG PTGSGKTTTL AAMVDAINEA RPVHILTIED PIEVIHRDKL AAVNQRELGT
DTADWAVALR AAMRQDPDVI LIGEMRDPDT VRAALAAAET GHFVMSTLHT TDAKETVNRI
IDFFPPHEQK QVRLGLAGSL RGIVCQRLVP RADGQGRVVA MEVAVNTPRL AEAVADPDRT
DTIPDIVSDG AYSGMQTFDQ HLVRLVLDGS VSVPDAKLVS SNTHDFSVML KRAGVDPALV
DAEPPR
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