| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_1128 |
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| Symbol | |
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| ID | 4599381 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 1195424 |
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| End bp | 1197115 |
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| Gene Length | 1692 bp |
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| Protein Length | 563 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639775724 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_922331 |
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| Protein GI | 119715366 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | [TIGR02533] general secretory pathway protein E |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGGTGC GCGCACAGAC CTCCGGAGAC ACCGTGCGTG CCCTGGTCGA GGGCGGCTGG
ATCACCCGCG ACCAGCTCAG CGAGGCGGGC CGGCTCGCGG ACGAGCGGTC CCAGACCGTG
CTCGAGGTGC TGCTCGAGAG CGGCTGGGTG GACCGCACCA CGGTCGTGCG CACCGCAGCC
GCCTCGGCCG GCCTGGAGTA CGTCGAGCTC ACCGACTTCA TCGTCGACAT GGCGGCCGTG
AGCCTGCTGC CGGCGGAGTT CGCCCGCCGC ACCGGCGTAC TGCCGCTGGT CCACGAGGAC
GGCGAGCTGC TGGTGGCCGT GAGCGTGCGC CAGGCGGGCG ACATCGAGCT CAAGGACGAC
CTGAGCCGGC TGACCCGCAG CCGGGTCCGC TTCGCGATCG CCGGCCGCAG CGACATCGAC
GCCCGGATCA ACCAGGTCTA CCGCGCCGAG GGCGAGCTCA CCGACATCAC CTCCGACCTG
GCGCCCGAGG ACGAGGTCGA CGACCTCAGT ACCCTCACCG AGGTCTCCGA CGAGGCGCCG
GTGGTCCGCT TCGTCAACCT GCTGATCAAC CAGGCGATCA ACGACCGCGC CTCGGACATC
CACATCGAGC CGACCGAGCG GGACATGCGG GTCCGGTACC GGATCGACGG GGTGCTCCAC
GACGCCCACC GCTCCCCGAA GAGCATCCAG AACGGGGTGA TCTCGCGCCT CAAGATCATG
GCCGAGATGA ACATCGCCGA GCGTCGGGTG CCGCAGGACG GCCGGATGTC GGTCACCCAC
CAGGGCCGGC GCATCGACCT CCGCGTCGCC ACCCTCCCGA CCGTGTGGGG CGAGAAGGTG
GTCGCCCGGA TCCTGGACAC CTCCAACACC CAGCTCGGCC TCGACGACCT GGGGTTCAGC
AACGAGAACT ACGAGCGCTA CCGGGCCTCG TACACCAAGC CCTACGGGAT GATCCTGGCG
ACCGGGCCGA CCGGGTCCGG CAAGTCGACG ACGCTCTACG CGACGCTCAA CCTGCTCAAC
CGGCCCGACG TCAACGTGAT CACCGTCGAG GACCCGGTGG AGTACCGCCT GCCGGGGATC
AACCAGGTCC AGACGAACGC GAAGGCGGGG CTGACCTTCG CCTCCGCGCT GCGCTCGATC
CTGCGCTCGG ACCCCGACAT CGTGCTGATC GGCGAGATCC GCGACCACGA GACCGCCCAG
ATCGCGGTCG AGGCCGCGCT GACCGGCCAC CTGGTGCTCT CGACGCTGCA CACCAACGAC
GCGCCCTCGG CGGTGACCCG CCTGATCGAG ATGGGCATCG AGCCGTTCCT GGTCGGGTCC
GCGCTCGACG CCGTACTCGC GCAGCGGCTG TGTCGCTCGC TCTGCGAGCG CTGCAAGCAG
GCCTACCAGC CGGATCCGGC GGAGCTGCAG CGGATCGGCT TCCCGTGGGC GGAGGGCGCG
GAGGTGCCGG TGCTGTACCG GCACGTCGGC TGCTCCTCCT GCTCGCAGAC CGGCTACCGC
GGCCGGATGG CGCTGCACGA GGTGATGACG GTCAGCGAGG AGGTCTCGCG GCTCGCCGTC
GCGCGCGCGT CGACCGACGA GGTCGGCCGC ACCGCCCGGG AGCAGGGGAT GACCACCTTG
AAGTCGGACG GCTGGCAGAA GGTGCTGCAG GGCCGCACCT CCATCGAGGA GGTCCTCCGG
GTCGTCGCCT GA
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| Protein sequence | MTVRAQTSGD TVRALVEGGW ITRDQLSEAG RLADERSQTV LEVLLESGWV DRTTVVRTAA
ASAGLEYVEL TDFIVDMAAV SLLPAEFARR TGVLPLVHED GELLVAVSVR QAGDIELKDD
LSRLTRSRVR FAIAGRSDID ARINQVYRAE GELTDITSDL APEDEVDDLS TLTEVSDEAP
VVRFVNLLIN QAINDRASDI HIEPTERDMR VRYRIDGVLH DAHRSPKSIQ NGVISRLKIM
AEMNIAERRV PQDGRMSVTH QGRRIDLRVA TLPTVWGEKV VARILDTSNT QLGLDDLGFS
NENYERYRAS YTKPYGMILA TGPTGSGKST TLYATLNLLN RPDVNVITVE DPVEYRLPGI
NQVQTNAKAG LTFASALRSI LRSDPDIVLI GEIRDHETAQ IAVEAALTGH LVLSTLHTND
APSAVTRLIE MGIEPFLVGS ALDAVLAQRL CRSLCERCKQ AYQPDPAELQ RIGFPWAEGA
EVPVLYRHVG CSSCSQTGYR GRMALHEVMT VSEEVSRLAV ARASTDEVGR TAREQGMTTL
KSDGWQKVLQ GRTSIEEVLR VVA
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