Gene Noca_1122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_1122 
Symbol 
ID4599375 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp1188521 
End bp1188991 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content71% 
IMG OID639775718 
Producthypothetical protein 
Protein accessionYP_922325 
Protein GI119715360 
COG category 
COG ID 
TIGRFAM ID[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.711782 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCGCAGC CTGACCGGGA CAGCGGGTTC ACGCTGATCG AGGTGATCGT CGTCGTGGCG 
CTCCTCGGTG CCCTGATGGC GATCTCGGTG GGTGGCTACG ACCGCTGGTC CCGGGCCAGC
GAGCAGTCCG GCACCGCTCG CGAGCTGCAG ACCCTGCTCC GCTCGACCCA CCAGCGTGCG
ATCACCGAGG GCACCGCGAT GTGCGTGCTG TTCGACACCG CCAACGACGA GTACGCCGTG
CACCGCGGCA CCTGCGCCAC CCCCGGCACG CAGGTCGACG GACCGTACCG GACCGACGGC
GCCCAGGTGC ACCTCGTCTC CCCGACCTTC ACCGGCTCCG GCGGACCCGG CGTCACGTTC
TACTCCCGCG GGACCGCCAC GAGCGGGAGC GTCCAGGTGA CCCGGACCGG CTCCGCGAAG
GTCTACACCC TCCACGTCGA ACAGCTGACC GGCCGTGTCT CGATCAGCTG A
 
Protein sequence
MSQPDRDSGF TLIEVIVVVA LLGALMAISV GGYDRWSRAS EQSGTARELQ TLLRSTHQRA 
ITEGTAMCVL FDTANDEYAV HRGTCATPGT QVDGPYRTDG AQVHLVSPTF TGSGGPGVTF
YSRGTATSGS VQVTRTGSAK VYTLHVEQLT GRVSIS