| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_1116 |
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| Symbol | |
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| ID | 4599369 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 1180451 |
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| End bp | 1181899 |
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| Gene Length | 1449 bp |
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| Protein Length | 482 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639775712 |
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| Product | succinate semialdehyde dehydrogenase |
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| Protein accession | YP_922319 |
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| Protein GI | 119715354 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01780] succinate-semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.103015 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCTGGG CTGCTGGGCG GGAGGTCAAC GCGCGTGACC GGACCGGTAC CAACCTCGTG
AACGGCAATC GCACGTTCGC AGTGGAGGAC CCCGCCACTC TCGAGCTCAT CGCAGAGGTG
GCCGACCACG GCGAGACCGA GGCGCGGGCC GCGGTCGATC GTGCGCACGA GGCCTTCGCG
GGGTGGTCAG GCACCTCTCC GCGGCAGCGT TCCGATGTGC TCCGACGCGC CTATGAGCTG
ATGCTGCGCG ACGAGGGACG GCTGAGCGCT CTGATAGCTC GCGAGAACGG CAAGTCGCTG
GCCGACGCAG CGTCCGAGGT TGTCTATGCC GCCGAGTTCT TCCGGTGGTA CGCCGAGGAG
GTGGTGCGCA CTGAGGGCTC GTACGGCGAG GCGCCGGCCG GCGGTGTACG GACCATCGTG
CACCACAAGC CCGTCGGGGT GGCGGCCCTG GTGATTCCGT GGAACTTCCC CGCCGCGATG
GCCACCCGCA AGATCGCCCC AGCCCTTGCC GCGGGATGCA CCGTTGTTCT CAAGCCGGCC
GCCGAGACCC CGCTGACCGC GATCGCGATC GCCGACTTGC TCGCCGAGGC CGGCCTACCG
GCCGGCGTCG TCGAGTTGGT CACCACCACC CACGCCGGCG CCGTCGTGAC CGCGTGGCTC
GAGGACGACC GGGTGCGCAA GGTGTCCTTC ACCGGCTCCA CCGGCATCGG CCGGTTGCTG
CTGCATCAAG CCGCCGACCG TGTCGTCAAC ACCTCCATGG AGCTCGGCGG CAACGCCGCT
TTCATCGTCA CCGAGGATGC CGACCTCGTC GACGCCGTCG CCGGGGCGAT GATCGCCAAG
TTCCGCAACG GCGGGCAGGC GTGCACCGCT GCGAACCGGA TCTACGTGCA CCGTGACGTC
GCAGACGCCT TCGTCGCGCT GGTCGGTGCC CAGGTCGAGA AGCTGAGCGT CGGTGCGGCG
AATGACGGCA ACATGATCGG CCCACTCATC AGCGCCGCGG CGGTGAGCCG CGTCGGTGCA
GCCGTGGACC GGGCGATCGA GGAGGGCGCA CGGGTCGCTG CGCGAGCACA ACTGCCCGAC
GCACCCGGGT ACTTCTACCC GCCGACCGTC CTCACCGACG TGCCCTCTAC CTCCTCGATC
CTGGCTGAGG AGATCTTCGG TCCAGTGGCT CCCATCGCGA CCTGGGACGA CGAACAGGAG
CTGCTTCGCC AAGTGAACGG TACTGAGTAC GGCCTCGCCG CGTACGTCTA CACCGGTCAC
CTCGAACGAG GGCTCCGCCT CGGCGAGCGT ATCGAGGCTG GCATGGTCGG CATCAACCGC
GGCATCGTCT CCGATCCCTC TGCGCCGTTC GGTGGCGTCA AGCAGAGCGG CCTGGGCCGT
GAAGGCGCTC GCGAAGGGCT CCGTGAGTTC CAGGAGACCC AGTACCTGAG TATCAGCTGG
GACGACTGA
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| Protein sequence | MPWAAGREVN ARDRTGTNLV NGNRTFAVED PATLELIAEV ADHGETEARA AVDRAHEAFA
GWSGTSPRQR SDVLRRAYEL MLRDEGRLSA LIARENGKSL ADAASEVVYA AEFFRWYAEE
VVRTEGSYGE APAGGVRTIV HHKPVGVAAL VIPWNFPAAM ATRKIAPALA AGCTVVLKPA
AETPLTAIAI ADLLAEAGLP AGVVELVTTT HAGAVVTAWL EDDRVRKVSF TGSTGIGRLL
LHQAADRVVN TSMELGGNAA FIVTEDADLV DAVAGAMIAK FRNGGQACTA ANRIYVHRDV
ADAFVALVGA QVEKLSVGAA NDGNMIGPLI SAAAVSRVGA AVDRAIEEGA RVAARAQLPD
APGYFYPPTV LTDVPSTSSI LAEEIFGPVA PIATWDDEQE LLRQVNGTEY GLAAYVYTGH
LERGLRLGER IEAGMVGINR GIVSDPSAPF GGVKQSGLGR EGAREGLREF QETQYLSISW
DD
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