Gene Noca_1106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_1106 
Symbol 
ID4599359 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp1168614 
End bp1169099 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content62% 
IMG OID639775702 
Productrestriction modification system DNA specificity subunit 
Protein accessionYP_922309 
Protein GI119715344 
COG category[V] Defense mechanisms 
COG ID[COG0732] Restriction endonuclease S subunits 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGCGA CGTCTGCAGC TCTCGGCGAC GTGCCCGTGG TCGCGAATGC TCCTGAGCCT 
GCGTACTTCC ACAACGTGAG CAACCGCGAC GGTGAAACAG TGGTGGTCGC CCGCTCTGGG
GCATACGCCG GCTTTGTCAG CTATTGGCGG GGACCGATCT TCTTGACCGA CGCGTTCAGT
GTCCATCCAC ACGATGGGGT CTTGATGCCG CGATTCGTCT TCCACCTTCT CCGGGCCAGA
CAGGCTCAGT TGCACGCGTT CAAGGCAGGA GCCGGTGTGC CCCACGTAAG GGTCAAGGAC
GTCGAATCGT ACGAGGTGCC AGTGCCCCCG CTGGATGTGC AGGCGCGGGT AGTGGAGATT
CTCGACAAGT TCGATGCCTT AGTGAATGAC GTGTCGGTCG GTCTTCCTGC TGAGATCGCG
GCGCGGCGCA AGCAGTACGA GTACTACCGC CACAAGCTCT TGACCTTCCC GGAGCGAGCC
GCGTGA
 
Protein sequence
MTATSAALGD VPVVANAPEP AYFHNVSNRD GETVVVARSG AYAGFVSYWR GPIFLTDAFS 
VHPHDGVLMP RFVFHLLRAR QAQLHAFKAG AGVPHVRVKD VESYEVPVPP LDVQARVVEI
LDKFDALVND VSVGLPAEIA ARRKQYEYYR HKLLTFPERA A