| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_1056 |
|---|
| Symbol | |
|---|
| ID | 4599662 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | + |
|---|
| Start bp | 1114149 |
|---|
| End bp | 1114925 |
|---|
| Gene Length | 777 bp |
|---|
| Protein Length | 258 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639775654 |
|---|
| Product | undecaprenyl pyrophosphate synthetase |
|---|
| Protein accession | YP_922261 |
|---|
| Protein GI | 119715296 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0020] Undecaprenyl pyrophosphate synthase |
|---|
| TIGRFAM ID | [TIGR00055] undecaprenyl diphosphate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCGGACT GGAAGCGCGG GCTCCGGCGG GTGCTCTACC CGGCCTACGA GGCACGGATG
CTGCGCCGGA TGCCGTCGGA GAACCTGCCC AAGCACATCG GGGTGATGCT CGACGGCAAC
CGTCGCTGGG CCCGGGCTGT GGGCCGTGAC ACCGCCGACG GGCACCAAGC GGGCGCGGCC
AACATCGAGC CGCTGCTGGG GTGGTGCGAC GAGGTCGGCA CCGAGGTCGT CACCCTGTGG
CTGCTCTCCA CCGACAACCT CAACCGCCCC GAGCGCGAGC TCGCTCCGCT GCTCGAGATC
ATCGCCGACG CGGTGGACTC GCTCGCCGAC CAGCGACGCT GGCGGGTGCA CCCCGTCGGT
GCCCTCGACC TGCTGCCCGC GTCGGTGGCC GAGCGGCTCA AGGCCGCCGA GGAGGCCACC
CGCGACGTCG ACGGGATGCT GGTCAACGTG GCGGTCGGGT ACGGCGGCCG GCGCGAGATC
GCGGACGCCG TACGCTCCCT GCTCCAGGAG GCCGCCGTCA ACGGCACCTC GCTCGAGGAG
CTCGCTTCGG CCATCGACGT CGAGTCGATC GCCGAGCACC TCTACACCAA GGGCCAGCCC
GACCCCGACC TGGTGATCCG CACCTCGGGG GAGCAGCGGC TCGGCGGCTT CCTGCTCTGG
CAGAGCGCGA AGTCGGAGTT CTACTTCTGC GAGGCCTACT GGCCCGACTT CCGCCGCGTC
GACTTCCTGC GCGCCCTGCG CGCCTACACC CTGCGCGAGC GTCGGTACGG CGCCTGA
|
|---|
| Protein sequence | MADWKRGLRR VLYPAYEARM LRRMPSENLP KHIGVMLDGN RRWARAVGRD TADGHQAGAA
NIEPLLGWCD EVGTEVVTLW LLSTDNLNRP ERELAPLLEI IADAVDSLAD QRRWRVHPVG
ALDLLPASVA ERLKAAEEAT RDVDGMLVNV AVGYGGRREI ADAVRSLLQE AAVNGTSLEE
LASAIDVESI AEHLYTKGQP DPDLVIRTSG EQRLGGFLLW QSAKSEFYFC EAYWPDFRRV
DFLRALRAYT LRERRYGA
|
|---|
| |