| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_1027 |
|---|
| Symbol | |
|---|
| ID | 4599688 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | - |
|---|
| Start bp | 1078861 |
|---|
| End bp | 1081236 |
|---|
| Gene Length | 2376 bp |
|---|
| Protein Length | 791 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639775626 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_922233 |
|---|
| Protein GI | 119715268 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0433] Predicted ATPase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGTCG GAACCCGCGC GCCCAGCCTT CGAGTGAGCA CTCTGGTGCG TGGCGCTGAC
GCCTCGCGCC GCCACGCGAC AGCGGTGGGC AAGCTCATCG ATCTCGTGTC GGAGTGGGGC
CCGACTGCGG GTCTCGACGT GACTATCCGC CGCCCGAAGC CAAGCGGCCC GACGCATGCT
GAGATCAGCC CCCAAGGTGA CATCCCCGAG CATTGGCAGG CCGACGTGCG CTGGGCACTC
GCGAGCATTG CCGACCTCGG GAGGGTACGG AACATCGGCG TTGTCGCAGC CCCGGCCCAC
CTCCTCGAAC TGCGGCTGAG CCGCGATCTT CCAGGTGCCG ACCGCTGGTA CGACTCCAAC
GCCCCCGACG CCACTCCTCA GGACACCGTC ACAGCGGAGC TCGCTCGCCA ACGCCGTATC
CGTGTGGTCA GCCCGTGGCC GCAGGCGTAC TACGCGCCGC TCGCGGACCT GGTCCAACTC
GGCGTGCCCG GCCTCGTTGT CCGTTACCGG TTGCAAGGTG CGTCGGCGAT TGAGCACACA
ATGCTCGACG ATGCACTGGA GAACTCGTGG CCTGACGCTC GCGGCCCACG TCAGGACTAC
CTCGGACAAG CGCTCCGTGT CCGGACGTTA ATCGGCGCAA GGGAACCGCT CCCGGCGCGG
ATGCGTGCAA CCCTACGGAG CTGGGCCACG AGTATCACCG CGGTTGAGGT CGATGACGAC
CTACGCAGCG AGGCGTGGGC TGGCGAGAGC CTCGCTGGCT TCGCCGTTCC GATCGGTGCT
GCGACAGCGA TGGTGCGCTT GCCTGTCAGC CATTATGAGC CGTTCCCGGG CCTCGCTACG
ACGGCGACCG CAGTCCCATC GCGCCCACTC GACCCGCTGC CTCCCAAACC CGACCGTGCC
GTTCGAGTGG GCAAGGCAAT GGCAGCCAGC GGCTTGTGGA TCGACGGCTC GCTCGACCTG
AACGACCTCG TTCAGCATGC CTTCATCCAG GGTAGCTCCG GCTCTGGTAA GTCGACCTTG
CTCGTGACAC TCGCTCTCGC GATCCAGGAG GCGGGCGGCA GCTACACGAT TCTCGATCCC
GAGGGCAGCA CGGTCGAGGC GCTCATCAGC CGCACACCTG TACGACTCTC GGGCACCACC
CAGGTCGTTC GTCACGGGAT CGCGGGCCTC GACGTACTCG TGAACATTTT CGGCACCACA
GTCGACAACG ACGTGATGGT CGACCTCTTC GCCGAGATGG TTCAGCACGC GATGGACCCC
GAGGGCACGG GAATCGTAGG TCCGCGCTGG CGACGTTGGT TCGCACTCAT CGCGAACGGT
GTCGCGGAGT ACTTCGGTCC TGAGGCCACG TTGGTCACGG TGGCGGCCGT CGCGAGCGAC
TCCGAGCGTG TTCGGCTGCT CAGCCAGCGG CTGATCGAAC GTGGCTCCGA GATCGGTAGG
CGACTGCTCT CGGAGTACGG CAGACAGTCC AAAGACTCCG CTGGGGATAC GACGAGCTGG
GCGGCATCGA AGTTCCAGCC CATCCTCTCC TCGACTGCGA CCCGCGCTGT GCTGGGTACT
CCGGGTGCCG GCTTGGACGT CCTCAAACTC ATGGAATCCG GCCGCTCGCT CGCTGTCGAC
CTGGGCATGC ACCGACTCGG CACATCCGGC GCGCGAATGG TCGGTGCGAT GTGGCTACTC
AGATACTGGG CGGCCCTGCA CGAACGGACG AACCGCGAGT CGCCGCACGT CCTCCTCGTA
GATGAGGCAC ACCTGTTCCA GTACGGCGCC TTGCCACAAC TTCTCGCTCA GGCTCGCAAG
TTCGGTGTCG GTGTTGTCAT CGCCACTCAG CACATCGGAC AGCTCTCCGC CGAGCTCGCC
GATGCGCTCG AGTCCAACAC GGGCACGTTC ATCAGTCTGC GCTCAGGCTT ACTCTCCGCT
AGCCGAGCAA GCATGCGACT GGAAGGGTGG CCGGTACAGG AGCTCGTGCG ACTTCCGAAC
CTGACTGCTG CCGCGAGCTT CTCCCGCGAT GGTGTGGTGA CCGACCCGTT CACTCTGCAT
GTCGATCACT TCGAGCGCCT TCGCGAGCTC CAGAATCGCG GCAAAGTCGG CTCAAGCGTC
GCAGCCTCAA TACTCTTGAG TTCCGAGCGT GCGAACAGAG CCGCGTCGGA AGGTCCCCCT
CCGCTCACCG ACACAGACGT CGTCGCACGA CTGGGTGCCC AGTCGGAGCA CACGTCTTCG
GACGACGAGG TCCCGCGCAT TCGGGCCGAC GGGCCAACGC AACGCTCATC GGCGCGGGGT
GACGGCAGGT TCCTCGACGA GTGGATCGCC AGGCAGAACG CGGACCGCCC TGACCCTGCG
GCGGGCGACC GGCGATCAAC TGCGGCGCCG AGCTGA
|
|---|
| Protein sequence | MSVGTRAPSL RVSTLVRGAD ASRRHATAVG KLIDLVSEWG PTAGLDVTIR RPKPSGPTHA
EISPQGDIPE HWQADVRWAL ASIADLGRVR NIGVVAAPAH LLELRLSRDL PGADRWYDSN
APDATPQDTV TAELARQRRI RVVSPWPQAY YAPLADLVQL GVPGLVVRYR LQGASAIEHT
MLDDALENSW PDARGPRQDY LGQALRVRTL IGAREPLPAR MRATLRSWAT SITAVEVDDD
LRSEAWAGES LAGFAVPIGA ATAMVRLPVS HYEPFPGLAT TATAVPSRPL DPLPPKPDRA
VRVGKAMAAS GLWIDGSLDL NDLVQHAFIQ GSSGSGKSTL LVTLALAIQE AGGSYTILDP
EGSTVEALIS RTPVRLSGTT QVVRHGIAGL DVLVNIFGTT VDNDVMVDLF AEMVQHAMDP
EGTGIVGPRW RRWFALIANG VAEYFGPEAT LVTVAAVASD SERVRLLSQR LIERGSEIGR
RLLSEYGRQS KDSAGDTTSW AASKFQPILS STATRAVLGT PGAGLDVLKL MESGRSLAVD
LGMHRLGTSG ARMVGAMWLL RYWAALHERT NRESPHVLLV DEAHLFQYGA LPQLLAQARK
FGVGVVIATQ HIGQLSAELA DALESNTGTF ISLRSGLLSA SRASMRLEGW PVQELVRLPN
LTAAASFSRD GVVTDPFTLH VDHFERLREL QNRGKVGSSV AASILLSSER ANRAASEGPP
PLTDTDVVAR LGAQSEHTSS DDEVPRIRAD GPTQRSSARG DGRFLDEWIA RQNADRPDPA
AGDRRSTAAP S
|
|---|
| |