| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_0981 |
|---|
| Symbol | |
|---|
| ID | 4599757 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | + |
|---|
| Start bp | 1030444 |
|---|
| End bp | 1031373 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639775583 |
|---|
| Product | LmbE family protein |
|---|
| Protein accession | YP_922190 |
|---|
| Protein GI | 119715225 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2120] Uncharacterized proteins, LmbE homologs |
|---|
| TIGRFAM ID | [TIGR03446] mycothiol conjugate amidase Mca |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.955127 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACGCAGC ACCCCACCCA CCACCAGGCT CACCGCCCGG CACGACCGCC CGACGGCCCC
CGCGCCGGCC TCCGCCTGAT GCACGTCCAC GCCCACCCCG ACGACGAGTC GTCCAAGGGC
GCCGCGACGA CGGCGCGCTA CGTCGCGGAG GGGGTCGACG TCCACGTCGC GACGTGCACC
GGCGGTGAGC GCGGCTCGAT CCTGAACCCG AAGATGGACC GGCCCGACAT CCTGGCGAAC
ATCACCGAGA TCCGCCGCCA GGAGATGGAA CGGGCCCGTG ACATCCTCGG GATCCGGCAG
GACTGGCTGG GCTTCGTCGA CTCCGGCTGG CCCGAGGGGG ACCCGAAGCC GCCGCTGCCG
GACGGCTGCT TCGCGCTGGT GCCGCTGGAG GAGGCGATCG CACCGCTGGT GCGCCTGGTG
CGGGAGTTCC GCCCGCACGT GATGACGACG TACGACGAGC GCGGGGGCTA CCCGCACCCC
GACCACGTGA AGTGCCACCA GGTCAGCGTC GCGGCGTTCG AGGCCGCCGC CGACCCGGAG
CGGTTCCCCG AGCTGGGCGA GCCCTGGCAG GTCCTCAAGC TCTACTACCA CCACTCCTTC
AACCGGCCCC GGATGGTGGC GATCGACGAG GCGATGCGTG AGCACGGCCT GGAGTCGCCG
TACGCCGAGC GCCTCAAGGA CTGGAAGCCG GAGCCGGAGT GGGATGCCCG GATCACCACC
CGGGTGCCGT GTGCGGACTA CTTCGGGGTG CGCGACCAGG CGCTGCTCGC GCACGCCACC
CAGATCGACC CGGACGGGTT CTGGTTCGCC ATCCCGCGCG AGCTGCAGGA GCGGGTCTGG
CCGACCGAGG ACTACGAGCT GGTCGTGAGC CACGTGCCCG CCCCGCCCCC CGAGGACGAC
CTGTTCGCCG GCATCACCGA CCAGCGCTGA
|
|---|
| Protein sequence | MTQHPTHHQA HRPARPPDGP RAGLRLMHVH AHPDDESSKG AATTARYVAE GVDVHVATCT
GGERGSILNP KMDRPDILAN ITEIRRQEME RARDILGIRQ DWLGFVDSGW PEGDPKPPLP
DGCFALVPLE EAIAPLVRLV REFRPHVMTT YDERGGYPHP DHVKCHQVSV AAFEAAADPE
RFPELGEPWQ VLKLYYHHSF NRPRMVAIDE AMREHGLESP YAERLKDWKP EPEWDARITT
RVPCADYFGV RDQALLAHAT QIDPDGFWFA IPRELQERVW PTEDYELVVS HVPAPPPEDD
LFAGITDQR
|
|---|
| |