| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_0919 |
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| Symbol | |
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| ID | 4599602 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 964472 |
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| End bp | 965458 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 639775521 |
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| Product | peptidase C60, sortase A and B |
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| Protein accession | YP_922129 |
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| Protein GI | 119715164 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3764] Sortase (surface protein transpeptidase) |
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| TIGRFAM ID | [TIGR01076] LPXTG-site transpeptidase (sortase) family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.372498 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCATGA CCCTCGAGAA GCCGGTGCGC CCGCGGCGGG CACTGCTCAA GGTGCCCGGA
GCCGCGTCGC GGCCGGGCGG GAGCCGGAAG CAGCCGGAGC GACCGGCTCG TACGGCCCGG
CGCCCCGCGC GCCCGGTGGG CCCGCCGACG GGCGCGGACG CCGCGTCGTC GGTGCTGTCA
TCCGCGTTCA CGATGATCGC GATCGTCTGC CTGTGGGTGG CCGCGCAGCT GTTGTTCCTC
GGCTCGATCT CCCAGAACCG GGCCCAGGAC CTGCTCTACG ACGAGCTCCG CGCCGACCTG
GCGGCGGCGA CCGCGCCGCT CGGCCCGGTC GTGCCGGTGG GCGACCCGGT CGCGCTGCTG
ACGATCCCGA GCATCGGCGT CGAGCAGGTG GTCGTCGAAG GCACCGCCTC CGGTGACCTG
CTCGACGGCC CCGGCCACCG GCGCGACACC GTGCTGCCGG GCCAGGTGGG CACCTCGGTG
GTCTACGGCC GCGCCGCCAC GTACGGCGCC CCCTTCGCCG ACCTGCCCGA CCTGCGGGCC
GGCGACGAGG TCGAGGTCAC CGGGGCGCAG GGCCGGACGA CGTACACGGT CCTCGGCGTG
CGTCGCGCCG GCGACCCCCT GCCGCAACCG GTCGCGGACG GCTCGGCGCG CCTGACGCTG
GTCACCGCCG AGGGCAGCGG GCGCCTGGGG GCGATCACGC CGGAGTCCGT CGTGTACGTC
GACGCCGATG CGACCAAGGC GTTCCCCGCA CCGCCCGGAC GACCCGGCGC GGTCCCCGAT
TCGGAGAAGG CGATGGCCGC CGACGACGGA GCACTGCCGC TCCTCGCGCT GTGCCTGGCC
CTCCTCCTGG CGCTGACCCT CGGGGTCGTC GCCGCTCGTC AGCGATGGTC GACGGCGCTC
GTGTGGGTGG TCGCAAGCCC GCTCGCGATC GCGCTGTCCT GGGCCGCCAC GGATGTGGTG
ATGCGACTGC TGCCCAACTT GATCTGA
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| Protein sequence | MTMTLEKPVR PRRALLKVPG AASRPGGSRK QPERPARTAR RPARPVGPPT GADAASSVLS
SAFTMIAIVC LWVAAQLLFL GSISQNRAQD LLYDELRADL AAATAPLGPV VPVGDPVALL
TIPSIGVEQV VVEGTASGDL LDGPGHRRDT VLPGQVGTSV VYGRAATYGA PFADLPDLRA
GDEVEVTGAQ GRTTYTVLGV RRAGDPLPQP VADGSARLTL VTAEGSGRLG AITPESVVYV
DADATKAFPA PPGRPGAVPD SEKAMAADDG ALPLLALCLA LLLALTLGVV AARQRWSTAL
VWVVASPLAI ALSWAATDVV MRLLPNLI
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