Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_0886 |
Symbol | |
ID | 4599893 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | + |
Start bp | 925050 |
End bp | 927533 |
Gene Length | 2484 bp |
Protein Length | 827 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 639775487 |
Product | hypothetical protein |
Protein accession | YP_922096 |
Protein GI | 119715131 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01451] conserved repeat domain |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACCATGT CTGCGCTCGC GCGCGCCCGC GCTCTTCGCC TTCCGCTCGC CGGAGCGATG ATCACCGGGG TCCTGGCCGC CGCCGGACTG TCCGGGACCG CCGCCGAGGC CACCACGCCG CCGGCCTGCG AGCCCGTGTC GAACGCGTTC GGACCGGCCA CCGGGTGGAC CGAGTTCGTC GAGGGGAACG GCAGCCGCGG CGCCGAGTCC GAGGGCGCCA TCGCGTACGG CGGGAACCAC ACTGCCGGCG GGATGACCGT CGGCACCCGC CTGCCGTCCG GCTTCCCGGT CGGCTCCGCC GCGCTCGTCG TGGCCGGCAG CCATGGCACC TACAACCTCC AGAAGGGCAG CGCCTACGTC ACGCCGCCGT CGGGGGTGAA CTTCAACGGG GGCCCCGGTA CGGGTTACCT CGCAAGCAAC CCCGTCGACT TCGCGACCTC CTTCACCCAG CTGCGCGCGC TGTCGACGGC GTGGGGGGCC GCGACCGCGA ACGGCACCGT CGGCAGCGGT ACGGCGGGAG GCAACCCCGC GCTGGTGTTC ACCGGCACCG ACCCGTCGTT GAACGTGTTC ACGCTGACGG TCGCTCAGGC CGCCGACCTC GCGTCCGGCA AGCACGTCGG CTACCAGGTC CCGGGTGGTG CCACGACCAT CATCAACGTG CCCGGGACCT CGGTGGCCCT GGCCGGCCAG ATGTGGGACC TGTCGTCCGG CGCCAGCCAG GTCAACGACG CGGTGATGGC GTCCTACCCC GGCATCATCT GGAACTTCCC CGACGCCACC ACGCTGACCA TGAGCTACGG GTCGGCCTGG GGCGGGCACA TCCTCGCGCC GAGGGCGGCG TTCACGGTGA GCGCGGTCGG CCACACGATC GGCCAGGTCA TCGCGAAGAG CTTCTCGTCG GCCTACGAGA CGCACCAGAA CCTGCTGCCG AGCAGCGCCT GCGTCCCGCC GCCGCCTCCG ACCCCGGGTA CGCCGGACGT GACGATCACC AAGTCGGCCT CGACCGCGAC CCCGACGGGC GGTGACACCT TCACCTACAC GTTGACCGCC ACGAACGTCG GTGACGCCGA CGCGACCGGC GTGGTCGTCC GCGACGCGCT GCCGGCCGGC GTCACGTTCG GGTCCGCCTC GGCGCCCTGC ACGCAGTCCG CCGGAGTCGT GACCTGCACG GTCGGCAACC TCGCGGCGGG AGCCTCCACC ACGGTGACGA TCACGGTGAC CGCGAACCCG ATCGCCGGCG CGGGACCGGT GGTGCACCCG GGTGGTGACC ACTGGATGAC GCCGTACCAC CCGGAGGCCC AGGTCGACCT CGATCCCGGC CAGCAGCGCA GCATCACGCT GGGCTGCAAC CCCGGGGACA TCCTCAGCGA CGGCGACTTC CGGATCGACC ACGTCGACCA GGGGACCGGC GCGTTCTCCG ACGTGAAGGT GCTCAGCTCG CGCAGCATCG GCACCGGCAC CTGGAAGGGC GTGATCCGCA ACGACGCGAC CGGCCGGGTC CAGGCGAAGG CCTTCATCGT CTGCCTGCCG GGCCGGACCG AGGGCGGCAA CGACGGCCAC CGCCACGACC TCCTGGTCGA CGCCGCCCCG GTCACGCTGA CCCAGTCGCT ACCGGTCGGT CGCACCCAGG TGACGCTGAC CTGTCGGGCC GGCACCGTGC CGATCGCGCC GGGCTACGAC CTCTCCTCCG CCGGTGCCGT CCTGGTCGGC TCGGAGACGA GCTATCCGGC CCGCACCTGG ACGCTGACCT TCCGCGCCAC CGCGCCGGTG ACCGTGACCG CCAGCGCGTT GTGCCTGTCG ACGACGACCA GCGCGGTCGA CGGGCACACC CACCAGCTGC GCTTCACCCA CGTCGTCGAC CACGTGACCG TTCCCGCGGA CACCCCGGCC GAGGGCCTCG AGATCAAGGT CAGCTGCCCG GACGACGGCA AGGGCGTCGT CGCGACCTTC GACCTGCCCG AGGGCGTCAC CACGTGGGGG CACGACCCTC GGCTCAAGGA GCGCGCGTTC CGGCTCTACA ACGAGTCGGG CGCGGCCACG GACGCGGTCC TCGACCTGGT CTGCCTCAAC GACCGCGTCG GGACCGACAT GGGCACCGAC GAGCCGACGA CCGTCGTCAA CACCGCCACC GTCTCGTCGA GCTCGACCGA CGCCAACCCC GCCAACAACG CGGCGAGCGC CACCGTGACG GTGCTGCCCG GCTCGTCCAC CACGAGCCTC GCCGGGCGGC TGCGGGTCTC CGGGTCGACG TCGTCGCTGC GGGTGCTGTC CTCGATGCCG GGCCGCGGGA AGCTCGCCGT CCGCTCGCAG GGCGTCCTTC TCGCCCGGGG TGAGGTCGGC CTGCGGGCCG GCGGTGAGGC CACCGCCCGG CTGCGGCTGA CCGACGCCGG CCGGCGCGGG CTCGCGCGCC TGGACCGGGT GCAGGTCACC GTCGACCCCA CCCGTGGCAG GACGGTCCGG CGGACGGTGC CCGTCCAGCG GTAG
|
Protein sequence | MTMSALARAR ALRLPLAGAM ITGVLAAAGL SGTAAEATTP PACEPVSNAF GPATGWTEFV EGNGSRGAES EGAIAYGGNH TAGGMTVGTR LPSGFPVGSA ALVVAGSHGT YNLQKGSAYV TPPSGVNFNG GPGTGYLASN PVDFATSFTQ LRALSTAWGA ATANGTVGSG TAGGNPALVF TGTDPSLNVF TLTVAQAADL ASGKHVGYQV PGGATTIINV PGTSVALAGQ MWDLSSGASQ VNDAVMASYP GIIWNFPDAT TLTMSYGSAW GGHILAPRAA FTVSAVGHTI GQVIAKSFSS AYETHQNLLP SSACVPPPPP TPGTPDVTIT KSASTATPTG GDTFTYTLTA TNVGDADATG VVVRDALPAG VTFGSASAPC TQSAGVVTCT VGNLAAGAST TVTITVTANP IAGAGPVVHP GGDHWMTPYH PEAQVDLDPG QQRSITLGCN PGDILSDGDF RIDHVDQGTG AFSDVKVLSS RSIGTGTWKG VIRNDATGRV QAKAFIVCLP GRTEGGNDGH RHDLLVDAAP VTLTQSLPVG RTQVTLTCRA GTVPIAPGYD LSSAGAVLVG SETSYPARTW TLTFRATAPV TVTASALCLS TTTSAVDGHT HQLRFTHVVD HVTVPADTPA EGLEIKVSCP DDGKGVVATF DLPEGVTTWG HDPRLKERAF RLYNESGAAT DAVLDLVCLN DRVGTDMGTD EPTTVVNTAT VSSSSTDANP ANNAASATVT VLPGSSTTSL AGRLRVSGST SSLRVLSSMP GRGKLAVRSQ GVLLARGEVG LRAGGEATAR LRLTDAGRRG LARLDRVQVT VDPTRGRTVR RTVPVQR
|
| |