| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_0869 |
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| Symbol | |
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| ID | 4599876 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 907548 |
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| End bp | 908882 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639775470 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_922079 |
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| Protein GI | 119715114 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.509231 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCGCA CATCACCCGT CTCGGGCTCG CTCGCCGGGA TCACCGCCCC CCGGCCGACG
CGTCGTGGCC TGCTCGTGGG CGGAGGTGCG CTCGGCCTGT CCGGCCTGCT GGTCGCGTGC
GGGGTCGGCG GTGGCGGCGG CGAGAAGGGC GGTGGTGGCA GCGGCAGCGG CAGCATCCGC
GCCCTGTTCA TGCAGCAGGC GGGCTACTCC GAGGACAACA TCAAGGAGAT GACGGCGGCC
TTCATGAAGG CCAACACCGA CATCAAGGTC ACCGCCGACT TCGTCTCCTA CGAGGCGCTG
CACGACAAGA TCGTGGCGGC CGCGCCGGCG GGCACCTATG ACGTCGTGCT GATCGACGTG
ATCTGGCCGG CCGAGTTCGG CACCAAGAAC ATCGTCGCCG ACGTCACCGA CCGGTGGCCC
GACGAGTGGA AGCAGCAGAT GCTCGGCGGC GCGGTCGCGA CGCCGCAGTA CGACGGCAAG
TTCTACGGGG TCCCGTGGAT CCTGGACACC AAGTATCTCT TCTACAACAC CGCCCAGCTC
GAGAAGGCGA AGGTCGACGC CGGCGAGCTC GACACCTGGG ACGGCGTCCT CAGCGCGGCC
CGCGCGCTCA AGCAGAGCGG TGTCCAGTAC CCGCTGATCT GGTCCTGGCA GCAGGCGGAG
GCCTTGATCT GCGACTACAC CCAGCTCCTC GGTGCCTTCG GCGGAACCTT CCTCGACGAC
GCGGGCCAGC CCGCGTTCAA CCAGGGAGGC GGCGTCGCTG CGCTGGAGTT CATGCGGCAG
AGCATCGTCG ACGGGCTCAC CAACCCCGCC TCGACGCAGT CGCTCGAGGA GGACGTGCGG
CGCGTGTTCT CCTCCGGTCA GGCCAGCATC GCCCTGAACT GGACCTACAT GTACGGCCTC
GCCAACGACC CCAAGGAGAG CCAGATCCCC GGCGACGTCG CGGTGCTGCA GACCCCGAGC
GGCCCGGTCG GCCGCCCCGG CGTGAACGGC AGCATGGCGC TCTCCCTCTC CGCGACCAGT
GAGAACCAGG ATGCCGGCTG GAAGTACATC GAGTACCTCA CCAGCCAGCC GGTCCAGGAC
AAGTACGCCC TCAGCTCGCT GCCCGTGTGG TCGTCGTCGT ACGACGACCC CAAGGTCGTC
GACACGAACC CCGCCGTCGT GCCGCAGGCC AAGAAGCAGC TCGGCGACAT GATCCTGCGG
CCCCAGGTCG CCAGCTACAA CGCGATGTCC CAGGTGCTCC AGGCCGAGAT CCAGAAGGCC
CTGCTCGGTG ACAAGGAGCC GCAGCAGGCG CTGGACGACG CAGCCTCCCA GGCGGCCGAC
CTGCTGGAGT CCTGA
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| Protein sequence | MKRTSPVSGS LAGITAPRPT RRGLLVGGGA LGLSGLLVAC GVGGGGGEKG GGGSGSGSIR
ALFMQQAGYS EDNIKEMTAA FMKANTDIKV TADFVSYEAL HDKIVAAAPA GTYDVVLIDV
IWPAEFGTKN IVADVTDRWP DEWKQQMLGG AVATPQYDGK FYGVPWILDT KYLFYNTAQL
EKAKVDAGEL DTWDGVLSAA RALKQSGVQY PLIWSWQQAE ALICDYTQLL GAFGGTFLDD
AGQPAFNQGG GVAALEFMRQ SIVDGLTNPA STQSLEEDVR RVFSSGQASI ALNWTYMYGL
ANDPKESQIP GDVAVLQTPS GPVGRPGVNG SMALSLSATS ENQDAGWKYI EYLTSQPVQD
KYALSSLPVW SSSYDDPKVV DTNPAVVPQA KKQLGDMILR PQVASYNAMS QVLQAEIQKA
LLGDKEPQQA LDDAASQAAD LLES
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