Gene Noca_0786 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_0786 
Symbol 
ID4598867 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand- 
Start bp829388 
End bp830023 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content79% 
IMG OID639775388 
ProductSAF domain-containing protein 
Protein accessionYP_921998 
Protein GI119715033 
COG category 
COG ID 
TIGRFAM ID[TIGR03177] Flp pilus assembly protein CpaB 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCCGTG ACCGCCTCGT CTCCCCTCTG CGTTCGGTAC GCCGGGCCGT CCTCGCCCGG 
CGCCGCCCGC TCGCCGCGCT GCTGACCGCC GTGGCGGTCG CCACCGGCAT CCACGCCGCG 
GCCGCTCCCC CGCCGCCCAG CGTCGACGTC GTCGTCGCCG CCCGGGACCT GACGGCGGGC 
ACGGTGCTGG CGCCGGGAGA CCTGCGCGCG GTCGGGTTCG CCCCCGACTC CGTGCCTGCG 
GGCGCCTCGG ACGACGCGAT CGACGCCGTC GGGCGCACCC TGGCCGCGCC GCTGCGCGCG 
GGCGAGCCGG TGACCGACGT CCGGGTCGTC GGCCCGGCGC TCACCGACGG CTACCCGGGA 
CTGACCGCGG TGCCGGTGCG GCTCCCCGAC GCCGGCATGG TCGACCTGCT GCGGGTCGGC 
GACCGGGTCG ACCTGGTCGC CGCCGATCCC CAGGGCGGTG GCGCGAGCGT GGTGGCGACC 
GACGTCCCGG TGCTCGCCGT ACCCGCTGCC GGTCCGGACG TCGGCGCGAC CGGGCTACCC 
GGCCGGCTGG TCGTCGTCGG CGCCGAGCCC GCCGACGTGG CCCGGATCGC GGATGCCTCG 
GTGCGCACCT TCCTCACGAT CGCCTTTCCC GGCTAG
 
Protein sequence
MRRDRLVSPL RSVRRAVLAR RRPLAALLTA VAVATGIHAA AAPPPPSVDV VVAARDLTAG 
TVLAPGDLRA VGFAPDSVPA GASDDAIDAV GRTLAAPLRA GEPVTDVRVV GPALTDGYPG 
LTAVPVRLPD AGMVDLLRVG DRVDLVAADP QGGGASVVAT DVPVLAVPAA GPDVGATGLP 
GRLVVVGAEP ADVARIADAS VRTFLTIAFP G