Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_0681 |
Symbol | |
ID | 4597545 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | - |
Start bp | 721453 |
End bp | 722223 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639775282 |
Product | regulatory proteins, IclR |
Protein accession | YP_921894 |
Protein GI | 119714929 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCGAACG ATGATGGTCA GCGCGTTCCA GCCGTGAGTT CCGCCGCCAA CGCGCTGCGC CTGCTCATGC TGCTCGAGCA CCAGCCCTCC CTGAGGGTCG TGGACGCCTC CAGGGCGCTC AACGTCGCCG GGTCGACCGC CCATCGGCTG CTGACCTGTC TCAAGGACGA GGGATTCCTT CGCCAGCCCG CGGGATCCAG GGCGTACGTG GCGGGACCCA ACATCCTCAA GCTCGCCCGG CACTTCAGCG ACCAGAACTC GCTGGAGCGG ATCGCTCACA CCCACCTCGA GCGGCTGTGC AAGCAGGTGA ACGAGGCGGT CAACCTGCAG GTGCTCGTGG GCCACGAGGT GCTCTGCCTC GACGCGGTGG TCGAGGATCG GCACGGCCTC CAGGTTCGAA GCATCCGGGG CCAACGCGTG TCGGCGTCGG TGTCGGCGGC CGGCAAGGTC CTGCTCGCGG CCCTCAAGCC CGCCGAGCTG GAGGAGGCAC TCGGCCAGGA TCCGCGGCAC CCGGATGCCG ACTGGAGCGC GACGCTGCAC GCAGAGCTCG CAACCATCCG TGAGTTCGGC TACGCCACGA ACATGGGCGA GCGCGAGCCC GGCGTCCACG CGGTGGCCGT TCCGATCAAC GACCCCACCG GCAAGTCGAT CGCCGCCCTC GCCGTCGCGG CGCCCTCGGT CCGCCTGCCG CACGTGCGCG TCAGCGGCCT GATCACTCAC CTGCGCGCGG CCAGCGGCGC GATCACCCTG GACTACTTCG GCTCGGACTG A
|
Protein sequence | MSNDDGQRVP AVSSAANALR LLMLLEHQPS LRVVDASRAL NVAGSTAHRL LTCLKDEGFL RQPAGSRAYV AGPNILKLAR HFSDQNSLER IAHTHLERLC KQVNEAVNLQ VLVGHEVLCL DAVVEDRHGL QVRSIRGQRV SASVSAAGKV LLAALKPAEL EEALGQDPRH PDADWSATLH AELATIREFG YATNMGEREP GVHAVAVPIN DPTGKSIAAL AVAAPSVRLP HVRVSGLITH LRAASGAITL DYFGSD
|
| |