| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_0620 |
|---|
| Symbol | |
|---|
| ID | 4596037 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | + |
|---|
| Start bp | 658209 |
|---|
| End bp | 659132 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639775225 |
|---|
| Product | LysR, substrate-binding |
|---|
| Protein accession | YP_921839 |
|---|
| Protein GI | 119714874 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGGTACG TCCTGGCAGT CGCCGACGCC CGGAACTTCA CCAGGGCCGC GGAGCAGTGC
TTCGTCGTCC AGTCAGCACT CAGCCAGCGC ATCGCCAACC TTGAGCGCGA GCTCGGCGTA
GCGCTGTTCG CCCGCACCAG TCGCCGTGTC GAGCTGACCG CGGCTGGCCA GGCGTTCATC
CCACCAGCGC GTCAGTGTCT TGAGGCTGCC GACCGGGCCG CAGCCGAAGC TGCTGCGGCC
GTAGGGCAAG TGCGGGGTCG GCTCACCATC GGCGTGATCC CAAACGTGGC AGCCGTCGAC
CTGCCCGATG TCCTACGGCG GGTCCGGGAG AAGTACCTTG CGGTTCGCAT CGAGTTGCGG
GTCGGCGCAA GTGACTGGCT GGCAGAACAG GTTGTCGCAG GGAATCTCGA TGTTGCATTT
CTGGGCCTCC CCGAGAACCA GAAGCCCGTC GGCGTGAGCT TCCGCGCATT GGCCAGCGAT
CGCCATGTTG CGGTCCTACC GGTCGACCAC CATCTCGCGG GGCGCGCCGA GGTCGGCCTA
GCGGACCTGT CCGACGAAGC GTTCGCGGAC TTTCCCTACG GTTCACCGGG CCGCGCCCAA
GGAGATTATG CCTTTGCCTC CGCAGAGATC CGACGAGACG TCGCATACGA GGTCGTTTCC
GCCGACCTGA TGCTGGATCT CGTCAGGCAT GGGCTTGCGG TGGCATTGCT GCCATCGATG
TCCGTAAACC CCATGCCCGA GCTGGCCATC GTCTCAGTTA CTGACGGCCC TGGCCGCGTC
GAGTACCTCG CTTGGAGCGA CTTCAATCCC AGCCCGGCGA CCCGTGCATT TCTCGACATT
CTAGCGGACG AGGCAAGCCC GGGAACCGGG CACGACGTGC ATCGTTCCGC TTTACCAGCG
ATCCGCGGAT CCGATCCGAC CTGA
|
|---|
| Protein sequence | MRYVLAVADA RNFTRAAEQC FVVQSALSQR IANLERELGV ALFARTSRRV ELTAAGQAFI
PPARQCLEAA DRAAAEAAAA VGQVRGRLTI GVIPNVAAVD LPDVLRRVRE KYLAVRIELR
VGASDWLAEQ VVAGNLDVAF LGLPENQKPV GVSFRALASD RHVAVLPVDH HLAGRAEVGL
ADLSDEAFAD FPYGSPGRAQ GDYAFASAEI RRDVAYEVVS ADLMLDLVRH GLAVALLPSM
SVNPMPELAI VSVTDGPGRV EYLAWSDFNP SPATRAFLDI LADEASPGTG HDVHRSALPA
IRGSDPT
|
|---|
| |