Gene Noca_0515 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_0515 
Symbol 
ID4596435 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand+ 
Start bp546289 
End bp546924 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content72% 
IMG OID639775129 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_921744 
Protein GI119714779 
COG category[R] General function prediction only 
COG ID[COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGATCA CGAAGTTCGG CCACGCCTGC GTCCGGGTCG AGCACGCCGG CACGACGGTC 
GTCCTCGACC CCGGCGTGTT CACCGACCCC GCCGCCCTGG ACGGGGCGGA TGCGGTGCTG 
ATCACCCACG AGCACGCCGA CCACTACCTG CCCGACCACC TGCTCGCCAC CGACGCTCCG 
GTGTTCACGA TCGAGGCCGT GGCGGCCCAC GTCCGCGAGG ACGTCCCGGC GGTGGCCGAG 
CGGCTCACCG TCGTCGCCCC CGGCGAGACC TTCGACGTCG GCGTCCCGGT GCGCGCCGTC 
GGGGAGCTGC ACGCGGTGAT CCACCCGGAG TTCCCGCGGT TCTTCAACAG CGGCTACGTG 
CTCACCCTCG GGGACCGCAA GGTGTACCAC CCTGGCGACG CCCTGACCGA GCCCGGCGAG 
GACGTCGACG TGCTGCTGGT GCCCGTGTCC GGGCCGTGGC TGAAGGCGTC CGAGGCGATC 
GACTTCGCCC GGGCCGTGAG GGCGCCGCGC AACCTGGCCA TCCACGACCG GGTCTACAGC 
GAGGCCGGCC TCGGCATCAT CGACGGGCAC ATGGACAAGT TCCTCCCGAA GGAGGGCCTG 
GAGTACGTCC GGCGCCCCGA CGGCCACGAC CTGTAG
 
Protein sequence
MRITKFGHAC VRVEHAGTTV VLDPGVFTDP AALDGADAVL ITHEHADHYL PDHLLATDAP 
VFTIEAVAAH VREDVPAVAE RLTVVAPGET FDVGVPVRAV GELHAVIHPE FPRFFNSGYV 
LTLGDRKVYH PGDALTEPGE DVDVLLVPVS GPWLKASEAI DFARAVRAPR NLAIHDRVYS 
EAGLGIIDGH MDKFLPKEGL EYVRRPDGHD L