Gene Noca_0511 details

Gene Information

• Locus tag: Noca_0511
• ID: 4597410
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nocardioides sp. JS614
• Kingdom: Bacteria
• Replicon accession: NC_008699
• Strand: +
• Start bp: 541936
• End bp: 543810
• Gene Length: 1875 bp
• Protein Length: 624 aa
• Translation table: 11
• GC content: 73%
• IMG OID: 639775125
• Product: Na+/H+ antiporter
• Protein accession: YP_921740
• Protein GI: 119714775
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG0025] NhaP-type Na+/H+ and K+/H+ antiporters
• TIGRFAM ID: [TIGR00831] Na+/H+ antiporter, bacterial form

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.0786286
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGGACG TGGACACCGC CCTCTTCCTG GTCGCGCTGG CCGTCGCCGT GCTCGCCGGC 
GTGGTGGTCG CCGGCCGGAT CGGGGTGCCC GCCCCGCTGC TGCTCGTGGT CGCGGGCGTC 
GCCGCGTCGT TCCTGCCGTT CCTGCCCGAG GTGCATCTCG AGCCGGACGT CGTGCTGTTC 
GGGCTCCTGC CGCCGCTGCT CTACTCGGCG GCGATCACGT CCTCGCTCGT GGACTTCAAC 
GCCAACCGCC GCCCGATCCT GCTGTTGTCG GTCGGCCTCG TCGTCTTCAC GACCCTCGGC 
GTCGGCGTTC TCGTCCACGA GCTGGTGCCC GGCCTGTCCT GGCCGGTCGC GTTCGCGCTC 
GGGGCGGTCG TCGCGCCACC GGACGCCGTC GCGGCCACCT CCATCGGCCG GCACATCGGG 
CTCCCCCGCA GGGTCGTGAC GATCCTCGAG GGCGAGTCCC TGTTCAACGA CGCGACCGCG 
CTGGTCTCGC TGCAGACCGC CCTCGGGGCA ACACTGGTGG GGGTCGAGCT CTGGCGTGTC 
GGCCTGGACT TCGTGGTCGC CGCGGGCGGG GGCGTGCTGA TCGGGGTGGT CGTCTTCCTC 
GTGGTCGGGG CGATGCGCAG GCGCCTGAGC GATCCGATGC TCGACGTCGC GATGTCCTTC 
GTGATCCCGT TCACGGCGTT CCTCGCTGCC GAGGAGGTCC ACGCGTCGGG CGTCGTGGCC 
GTCGTGACCG CCGGCCTGCT GCTCGGCCAC CGGGCGCCCG TCCTGCAGAC CGCGCAGTCG 
CGGATCGCCG AGCGGATCAA CTGGCGCACG ATCGCGTTCC TGCTCGAGAA CACCGTGTTC 
GCGCTGATCG GACTCCAGGC CCGGTGGCTG TTCGACGACC TGGGGGAGAG CACGCTCTCG 
CCGGCCCGGA TCATCGCAGT CTCGGCCGCC ACGCTGGTCG CGGTCATCGT GCTGCGGCTC 
GTGTGGGTCT TCCTCTCGCG CTCGCTGCTG GTCCGCCCGC GCGTGGACCC CGCGACCGGA 
CAGGTTCCGC CGTGGTCGTT CACACTCCTG CTCGGCTGGT CCGGCATGCG CGGGGTGGTC 
ACCCTGGCCG CGGCGTTCCT GATCCCGCCC GACACCCGGC ACCGCGAGGT GCTGCTCGTC 
GTCGCGTTCG CCGTCGTGGC GGGCACCCTG CTCGTCCAGG GGCTCAGCCT GCCGTGGCTC 
ACCCGCCGGC TGCACGTCCC CGCCCCGGAC CCGCTCGACG ACGCGCTCGC CCGCGCCACC 
CTGCTCCAGC AGGCGTCGAA GGCGGCGGTC GAGGAGCTCG AGCGGCAGGA GTACGACGAC 
CAGGCCGGCG TGGGCGACCT GATCCGGCAA CGGCTCGACC AGCGGAACTT CGCCGCGTGG 
GAGCGCCTGG GGACCACCGC CGACCAGGAG TCACCGGCCG CCGTCTACTA CCGCATCCGG 
ATGGCGATGA TCGCCGCCGA GCGCCGACGG ATCCTGGAGA TCCGGCGCTC CGGCACCGTG 
GCCTCCGAGG TGATCGCCGA GGTGCTCTCG ATGCTCGACG TCGAGGAGTC GATGCTCGAC 
AACGCCCACC AGGAGCGGGA CGAGGCCGAG GACTACGCCC GTCGGCGCTG GACGCTCGGG 
GAGACCTGCG ACGACCTGGG CCGCTACCCG GTCGTCGACG CCGAGCCCGC GACGTACTGC 
CAGGCCTGCC TGGACGAGGG CACCCGCTGG GTGGCGTTGC GCCGCTGCCT GGAGTGCGGC 
AACCTCGCCT GCTGCGACTC CTCACCCCGC CAGCACGCCA CCGCGCACTT CCGGGAGACC 
CAGCACCCGG TCATGCAGTC CGCCGAGCCC GGCGAGGACT GGCGCTGGTG CTACCTCCAC 
CACCTGACGG CATGA 

 

Protein sequence

MADVDTALFL VALAVAVLAG VVVAGRIGVP APLLLVVAGV AASFLPFLPE VHLEPDVVLF 
GLLPPLLYSA AITSSLVDFN ANRRPILLLS VGLVVFTTLG VGVLVHELVP GLSWPVAFAL 
GAVVAPPDAV AATSIGRHIG LPRRVVTILE GESLFNDATA LVSLQTALGA TLVGVELWRV 
GLDFVVAAGG GVLIGVVVFL VVGAMRRRLS DPMLDVAMSF VIPFTAFLAA EEVHASGVVA 
VVTAGLLLGH RAPVLQTAQS RIAERINWRT IAFLLENTVF ALIGLQARWL FDDLGESTLS 
PARIIAVSAA TLVAVIVLRL VWVFLSRSLL VRPRVDPATG QVPPWSFTLL LGWSGMRGVV 
TLAAAFLIPP DTRHREVLLV VAFAVVAGTL LVQGLSLPWL TRRLHVPAPD PLDDALARAT 
LLQQASKAAV EELERQEYDD QAGVGDLIRQ RLDQRNFAAW ERLGTTADQE SPAAVYYRIR 
MAMIAAERRR ILEIRRSGTV ASEVIAEVLS MLDVEESMLD NAHQERDEAE DYARRRWTLG 
ETCDDLGRYP VVDAEPATYC QACLDEGTRW VALRRCLECG NLACCDSSPR QHATAHFRET 
QHPVMQSAEP GEDWRWCYLH HLTA