| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_0366 |
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| Symbol | |
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| ID | 4597752 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 391371 |
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| End bp | 392093 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 80% |
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| IMG OID | 639774980 |
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| Product | type II secretion system protein |
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| Protein accession | YP_921596 |
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| Protein GI | 119714631 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2064] Flp pilus assembly protein TadC |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00194473 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCGCGC TGCCGGCGTT GCTTCCGGTG CTCGCGGCGG CCATGGCGGC GGCGCTCCTG
CTCCCTCCTC GCCCGACCCT GCCCGGCGCA CGGTCCCCGA GCGACCACGC GCCGTCCCCC
GGGTGGCTGC ACCGGCACCG ACTGCTGTGG AGTGGGCTGG CCGGCACCGG CGCCCTGGTT
CTCGTCGGCG GTCCGGCCGG CCCGCCGGCC GCCCTGGTCG CGGCGGTGGC CGCCTGGACG
GTGATCGGGC GCGCCGAGCC GCCCGACGTA CGACGCCGCC GCGAGGCGGT GCGCCGGGAC
CTGCCGCACG TCGTGGACCT GTTCGCCGCC ACCCTGCGCG GCGGCGCCGC TCCCGCCGAC
GGGATCGCAC TGGTCTGCAC CGCCCTCCCC GGCCCGGCCG CCGACCGGCT CGCGGGGGTC
GCGGCCCGGC TCGCGCTCGG GCTGGACCCG GGCCAGGTCT GGTCGGCACT CGCCGACGAC
CCCCATCTCG GCCGCCTCGG CCGCACCCTC GCCCGCGCGC ACTCCTCGGG GGCGCCGGTG
GTGGCCGCGG TCGAGCGGCT CGCCGACGAC CTCGCCCGGT CCGCTCGCGC CGAGACCGAG
GAGCGGGCCC GGGCGGTCGG CGTGAAGGCC GCCCTGCCCC TCGGCCTGTG CCTGTTGCCG
GCGTTCGTGC TGATCGGCAT CGTCCCGCTC GTGGTCGCCC TCCTCGCGAG CCTCGACATC
TGA
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| Protein sequence | MSALPALLPV LAAAMAAALL LPPRPTLPGA RSPSDHAPSP GWLHRHRLLW SGLAGTGALV
LVGGPAGPPA ALVAAVAAWT VIGRAEPPDV RRRREAVRRD LPHVVDLFAA TLRGGAAPAD
GIALVCTALP GPAADRLAGV AARLALGLDP GQVWSALADD PHLGRLGRTL ARAHSSGAPV
VAAVERLADD LARSARAETE ERARAVGVKA ALPLGLCLLP AFVLIGIVPL VVALLASLDI
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