| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_0365 |
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| Symbol | |
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| ID | 4597751 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 390598 |
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| End bp | 391374 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 79% |
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| IMG OID | 639774979 |
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| Product | type II secretion system protein |
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| Protein accession | YP_921595 |
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| Protein GI | 119714630 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4965] Flp pilus assembly protein TadB |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000784709 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGCGG TCGCGGTCGG TGCCGCGGCG CTCGCGATGC TGCTGCTGGT CCGGCCACCG
GCCCGTCCCG CGGCATCGGG GGCGGCGGTC GTGGAGCGCC GCTGGGTGCC GGTGGCCGTG
CTCGTGGCCG GGGTCGTGGC CGCGCTCGCG ATGCCGCGCC TCGGTGGCCT CGCCCTCGTG
CTCAGCGGGA CCGCGACGGG TGCCGCCGGG CTCTGGCGGC GCCGGCGCCG GCGTCGGGCC
GCCGAGCGGG TGGCCGCGCA GGTGCTGGAC ACCTGCGAGC TGCTGGCCGG CGAGCTCACC
GCCGGGCGGC CGCCCGGCGA GGCACTGCAG CGGGCAGCCG CGTCCTGGCC GCCGCTGGCC
CGGGTCGCCG AGGCGTTCCG GGTGGGAGCA GACGTGCCGT CCGCCCTGCG CGTCCTGGCC
GCCGACCTCG AGGGCGCGCG GGACCTGCGC GTCGTCGCGG CGGCCTGGCA GGTCGCCCAC
CGGACCGGAC AGGGTCTCGC CTCGGCCGTC GAGCGGGTGG CGGAGTCGTT GCGTGCCGGT
GCCGCGACCC GGCGGATGGT CACCGGGGAG CTCGGCTCGG CCCGCGCCAC CGCCCGCCTG
GTCGCGGGAC TGCCGGTGCT CGCCCTCGCC ATGGGGTCGG GCGCCGGTGG CGACCCCTGG
GGCTTCCTGC TCGGCCATCC CGCTGGTCTC CTGTGCCTTG CCGGCGGGTT GGCCTTCGGA
CTGGCCGGCC TGTGGTGGAT CGAGGCGATC GCCGCCGCGG CCGAGGAGTC GTGGTGA
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| Protein sequence | MTAVAVGAAA LAMLLLVRPP ARPAASGAAV VERRWVPVAV LVAGVVAALA MPRLGGLALV
LSGTATGAAG LWRRRRRRRA AERVAAQVLD TCELLAGELT AGRPPGEALQ RAAASWPPLA
RVAEAFRVGA DVPSALRVLA ADLEGARDLR VVAAAWQVAH RTGQGLASAV ERVAESLRAG
AATRRMVTGE LGSARATARL VAGLPVLALA MGSGAGGDPW GFLLGHPAGL LCLAGGLAFG
LAGLWWIEAI AAAAEESW
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