| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_0253 |
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| Symbol | |
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| ID | 4596137 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 270200 |
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| End bp | 271954 |
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| Gene Length | 1755 bp |
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| Protein Length | 584 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 639774866 |
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| Product | DNA helicase/exodeoxyribonuclease V, alpha subunit |
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| Protein accession | YP_921485 |
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| Protein GI | 119714520 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
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| TIGRFAM ID | [TIGR01447] exodeoxyribonuclease V, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACTGAGC TGTTCGAGCC CGTCGACGAG CACGACTGGC GGATCGCCAC CGGCGCCACC
GGGCTGCTCG CCACCTTCAA CGCGGCCGGG GTGCTGACCT CCAGCGACGT GCACGTCGCC
ACCCGGATCG GTGTCCTCGG CGGCGAGACC GACGAGCGGA TGCTGCTGGC GGTCGCGCTG
ACCGTGCGGG CCGTCCGCCG CGGCTCGGTC TGCCTCGACC TCGCCGGCGT GGCCGCGACC
GCCCCGGACC TGCCCTGGCC CGACGAGTGG CCGGTGGCCG GCTCGCCGCT CGTGCACGCC
GGGGTGGTGC GCTGGGACCA CGAGCTGCTC TACCTCGACC GCTACCACCG GCTCGAGCGG
CAGGTCCACG ACGACCTGGC CGCGCGCCTC GCGCTCGCAC CGCCGGCGGT CGACGAGCAG
CGGCTCGAAG CGGCGCTGGC GAGGCTCGGC GGCGGGCACT TCAGCGAGGA GCAGCGGGCG
GCCGTGGTCG CGGCCGTGCG CCGGCGTACC ACCATCCTGA CCGGCGGCCC CGGCACCGGG
AAGACCACGA CGGTGGCGCG CCTGCTCGCG CTGCTCGCCG ACCAGGCCGC CGGACGAGGG
AGCAGGCTCT CGATCGCGCT GGCGGCGCCG ACCGGCAAGG CCGCGACCCG GCTGCAGGAG
GCCGTGGTCA CCGAGCTCGC GGCGGTCGCG ACGGCCTGGC CGGAGGCGCC GGCCCTGGTC
GGACGACTCG ACGGGCTGAC CCTGCACCGG CTCCTCGGCT GGCGCCCGGA CAACGCGACC
CGGTTCCGCC ACGATCGCGC CAACCGGCTC AAGTACGACG TGGTCGTGGT CGACGAGTCC
TCGATGGTCG AGCTGACGAT GATGGGCCGG TTGCTGGAGG CCCTGCGCCC GGACTCGCGA
CTGGTGCTGG TCGGCGACCC GCAGCAGCTC ACCTCGGTCG GCGCGGGTGC GGTGCTGAGT
GACCTGGTGG CCGGCTACGA GGGCCGGCCG GACTCGCCGG TCGCGGCGTT GAGCACCAAC
TTCCGCTCCG AGGAGGACAT CAAGTCCCTG GCAGCGGCGC TGCGCTCCGG CGACGCCGAC
GAGGTGATCG CGGTGCTGCG CGCGCCGTCG GAGCAGGTCT CCTGGGTCGA GACCTCCGAC
GCGGCCGAGG TCGAGGCCGC GCTGCGCCCC GACTCGCTCG CGTCCGCCCG CGCGGTCTGG
GCCGCGGCGC GCGACGAGGA CGCCGAGCGC GCGCTGGCCG AGCTGGACCG CTACCGGCTC
CTGTGCGCGC ACCGCGAGGG GCTCTACGGC GTCCGCCGTT GGAACCACCT CGTCGAGCGC
TGGCTCGCCG AGGACCCCGA CGTGGAGATC TACGACGAGT GGTACGTCGG CCGTCCGCTG
CTGGTCACCA GCAACGACTA CGCCCTCGAC GTCTACAACG GGGAGAGCGG GGTCGTCGTG
CGGCAGGACC AGCGGCGGCG AGTGTTCGTG GCGGGGTCGG AACGGCTCAA GGAGTTCGCG
CCCGGCCGTC TCGAGGCGGT CGAGACGATG CACGCGATGA CGATCCACAA GAGCCAGGGC
AGCCAGGCCG ACCGGGTGAG CGTGCTGCTC CCTGACGAGG GGTCGCGGCT GCTCACCCTC
GAGCTGTTCT ACACGGCGAT CACCCGGGCC CGGCACCACG TGCGCGTGGT CGGGTCGGAG
GCCGCCGTGC GCGCCGCCGT CGACACCCGG GCGCAGCGGG CCACCGGTCT GCGGGCGCGT
CTCGCGGACG GTTGA
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| Protein sequence | MTELFEPVDE HDWRIATGAT GLLATFNAAG VLTSSDVHVA TRIGVLGGET DERMLLAVAL
TVRAVRRGSV CLDLAGVAAT APDLPWPDEW PVAGSPLVHA GVVRWDHELL YLDRYHRLER
QVHDDLAARL ALAPPAVDEQ RLEAALARLG GGHFSEEQRA AVVAAVRRRT TILTGGPGTG
KTTTVARLLA LLADQAAGRG SRLSIALAAP TGKAATRLQE AVVTELAAVA TAWPEAPALV
GRLDGLTLHR LLGWRPDNAT RFRHDRANRL KYDVVVVDES SMVELTMMGR LLEALRPDSR
LVLVGDPQQL TSVGAGAVLS DLVAGYEGRP DSPVAALSTN FRSEEDIKSL AAALRSGDAD
EVIAVLRAPS EQVSWVETSD AAEVEAALRP DSLASARAVW AAARDEDAER ALAELDRYRL
LCAHREGLYG VRRWNHLVER WLAEDPDVEI YDEWYVGRPL LVTSNDYALD VYNGESGVVV
RQDQRRRVFV AGSERLKEFA PGRLEAVETM HAMTIHKSQG SQADRVSVLL PDEGSRLLTL
ELFYTAITRA RHHVRVVGSE AAVRAAVDTR AQRATGLRAR LADG
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