| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_0144 |
|---|
| Symbol | |
|---|
| ID | 4597593 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | + |
|---|
| Start bp | 157493 |
|---|
| End bp | 159649 |
|---|
| Gene Length | 2157 bp |
|---|
| Protein Length | 718 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639774754 |
|---|
| Product | MMPL domain-containing protein |
|---|
| Protein accession | YP_921376 |
|---|
| Protein GI | 119714411 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2409] Predicted drug exporters of the RND superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCACCA TCACGACGCC CCCTGACGTC GACCCCGAGA TCGGCTACCG GCCCGGCCCC
CTGGGCCGGC TCGGCGTGTG GGTCACCCAT CACACCCGAG CGACCGCGGT CGTGTGGCTG
CTGGTCATCG TCGGCCTCGG CGCCTTCGCG CCCAAGGTCG AGGCCGAGCT GTCCGGCGCC
GGCTGGCAGG CCGACGGCTC GGAGTCCGTG GCCGCCCGCG AGCTCGCCCA GGAGCACTTC
GGCGGCAACG CCAGCTCCGC GATCCAGGTC GTCGTGCACA GCTCGAAGAT TCCGCTGGAC
AGCTCCTCCG GACAGCGGAT CCTGGACCGG GCCACCGCCC TGCTCGAGGA GGACCCGCGG
ATCGCCGAGG TCGTCCAGCC ACAGCCCGGG GCCACGCTGA GCGAGGACGG CCGGACCGCC
GTGCTGCTCG CCGGGGCGGC CGCCGACCCC AACGAGATGG TGCGCGCCGC GGACGACCTC
AAGGGCCCGC TCCAGGACCT CTCGACCGCC GGCATCCAGG TGAACCCGAC CGGCGCCTCC
TTGCTCTGGT CGGACTTCAA CGAGGCGAAC CTGGACGCGA TGCTGAAGTC GGAGATGTTC
TCCTGGCCGG TCACCCTCGC GATCCTGGTG CTCGCCTTCG GCGCCCTCGT CGCCGCCGGG
CTGCCGCTCA TCCTGACCCT CGCCGGGCTG GTCGCCTCGG CCGGCTCGCT GGTGCTGATC
AACCAGGTCG TCCCGGTCTC CATCTGGGCG ATGAACTTCG CGATGATGTT CGCGCTCGCC
CTGGGCATCG ACTATGCGCT GTTCCTCGTC GTGCGGTTCC GGGCGGCCCG GATGGGCCAC
CACGAGAGCC CCCGCCAGGC GATCGCCGAG ACCATGGACA CCGCCGGCAA GGCCGTGCTG
CTCTCCGGCG CCACGGTGCT GATCTCCCTG TCCGCGGTGA TGCTGGTGCC GTCGCCGTCG
TTCCGGTCGA TGGCGGGCGG GATCATGCTC TCGGTGGTCT TCGTGCTCGC CGCGACGCTC
ACCTTGCTCC CGCTCGTGCT GCACCTCCTC GACCAACGGA TCAACAAGCT CGCGCTGCCG
TGGGTGCACA CCGGTGAGCA CCGGTCCCCG AAGTTCGCGG CCTGGGGTGA GCGGCTGTGG
AAGCGCCCGA TCGTGTTCGG GCTGGCCGCG CTGTTCATCC TGCTCGCCCT CGCCGCCCCG
ATCCTCGGCC TGAAGACCGC GATGCCCTCG ATCAAGGTGC TGCCCGAGGA CGCCAGCGCC
CGGGTCGGCT ACGACCTGGT GCAGGAGAGC TTCGGCGAGG GCGCGCCCGG CACCCTCCAG
GTGGTGACGA CCGGCGCCGA CGCGGAGGCG ACGTACGACG CCCTCGGCGC CGACCCGGGC
ATCGCCGCCG CGATGCCGCC GATGCCCGCG CCGGACGGCA CCGACCACGT GCTGATCCAG
GCGGTGCCCA CCGTCGACCC GTCCGACCCC GGGCTCGGCG CGACCGTCGA CCGGCTGCGC
GCCGACCTCC CCGAGTCCGC GATCGTCGGC GGGGCCGCGG TCGAGAACCT CGACCTGAAG
TCCCAGCTCG ACGATTCGAC CCCGCTGGTG ATCGGCGTGA TCCTGGCGCT CGGCTTCCTG
CTCCTCCTGG TCGCGCTCCA GGCGCCGCTG ATCGCGCTGC TCGGGACGCT GGCCAGCCTG
CTCTCGACCG CGGCGGCCTT CGGGGTCGCG CGGCTGATCT TCCAGGAGGG CTGGGGCTCG
GGCCTGCTGG GCTTCGAGAG CCAGGGCTTC CTCGACGCCT GGGCGCCGGT GTTCTTCTTC
GCGATGATCT TCGCGATCGC GATGGACTAC ACCGTCTTCC TGCTGGCCTC CGCCAAGGAG
CACTTCGAGC ACACCGGCGA CCCGAAGGAC GCCATGGTCG GCTCGCTCGC GCACTCCGGC
CGGGTGATCT TCGCCGCCGG AGCGGTCATG GTCGCCGTGT TCTTCACGTT CGCGCTGTCC
GGACCGCTCC CGCCGAAGGA GATGGGCGTC GTGCTCGGCG TCGCCGTCCT GCTGGACGCG
TTCCTGGTCC GCCTGGTGCT GCTCCCGGTG CTGCTGCGGC TCACGGGCCG CGCGGCCTGG
TACGTGCCCC GCTGGCTCGA CCGGGTGCTC CCCGACGTCC GCTTCTCGCA CAGCTGA
|
|---|
| Protein sequence | MSTITTPPDV DPEIGYRPGP LGRLGVWVTH HTRATAVVWL LVIVGLGAFA PKVEAELSGA
GWQADGSESV AARELAQEHF GGNASSAIQV VVHSSKIPLD SSSGQRILDR ATALLEEDPR
IAEVVQPQPG ATLSEDGRTA VLLAGAAADP NEMVRAADDL KGPLQDLSTA GIQVNPTGAS
LLWSDFNEAN LDAMLKSEMF SWPVTLAILV LAFGALVAAG LPLILTLAGL VASAGSLVLI
NQVVPVSIWA MNFAMMFALA LGIDYALFLV VRFRAARMGH HESPRQAIAE TMDTAGKAVL
LSGATVLISL SAVMLVPSPS FRSMAGGIML SVVFVLAATL TLLPLVLHLL DQRINKLALP
WVHTGEHRSP KFAAWGERLW KRPIVFGLAA LFILLALAAP ILGLKTAMPS IKVLPEDASA
RVGYDLVQES FGEGAPGTLQ VVTTGADAEA TYDALGADPG IAAAMPPMPA PDGTDHVLIQ
AVPTVDPSDP GLGATVDRLR ADLPESAIVG GAAVENLDLK SQLDDSTPLV IGVILALGFL
LLLVALQAPL IALLGTLASL LSTAAAFGVA RLIFQEGWGS GLLGFESQGF LDAWAPVFFF
AMIFAIAMDY TVFLLASAKE HFEHTGDPKD AMVGSLAHSG RVIFAAGAVM VAVFFTFALS
GPLPPKEMGV VLGVAVLLDA FLVRLVLLPV LLRLTGRAAW YVPRWLDRVL PDVRFSHS
|
|---|
| |