Gene Noca_0140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_0140 
Symbol 
ID4597589 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp155620 
End bp156168 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content75% 
IMG OID639774750 
ProductTetR family transcriptional regulator 
Protein accessionYP_921372 
Protein GI119714407 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCGTC GCGACCAGAT CCTCGCCACC GCGGCGGAGC TGTTCGCGGC GCACGGGTAC 
CACGGGGTCT CGGTGGCCGA CCTGGGCGCG GCCTGCGGGA TCTCCGGGCC GGCGCTCTAC
AAGCACTTCG CCTCCAAGCA GGCGGTCCTC GCCGAGATGC TGGTCGCGAT CAGCGAGGAG
CTGCTGCGGG TGGGCACCGA GCGGGTCGCC GCCGCGACCG GCCCCCGAAC CGCCATCGCC
GCACTCGTCG ACTGGCACGT CGACTTCGCG CTGCGGCACC GGGCCCTGAT CGTCGTCCAG
GACCGGGACT GGGAGGCGCT CCCCGAGGAG GCCCGCGAGC GGGTCCGCAC CCTCCAGCGG
GAGTACGTCG ACCTGTGGGC CGCCCAGCTG CGGCTCGCCG ACCCGCGGCT CGACCTCGCG
ACGGCGCGGG CCATGGCGCA CGCGGCGTTC GGCCTGATCA ACTCCACCCC CCACAGCGGC
CTGCTCCCCG ACACCGACAT GCGCGGCCTG CTCAGCCGGA TGGCCCTGGG CGCGCTCGGT
GCCGGATGA
 
Protein sequence
MSRRDQILAT AAELFAAHGY HGVSVADLGA ACGISGPALY KHFASKQAVL AEMLVAISEE 
LLRVGTERVA AATGPRTAIA ALVDWHVDFA LRHRALIVVQ DRDWEALPEE ARERVRTLQR
EYVDLWAAQL RLADPRLDLA TARAMAHAAF GLINSTPHSG LLPDTDMRGL LSRMALGALG
AG