Gene Noca_0139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_0139 
Symbol 
ID4597588 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand+ 
Start bp154925 
End bp155605 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content77% 
IMG OID639774749 
Productzinc finger SWIM domain-containing protein 
Protein accessionYP_921371 
Protein GI119714406 
COG category[S] Function unknown 
COG ID[COG4279] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.389812 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGGGA CCGTGCTGCA CCCCCGGGTC GCGCCGCGGC GGGCGACGGC GCGCGCGACG 
ACCTGGTGGG GCAAGGCGTG GGTGCGGGCC GTCGACGAGG CGGCGTACGC CGAGGCCGAC 
CTGGTGGCGA GCCGGGCGCT CGCCCGCGCC GGCCGGGTGG GTCAGATCGC CACCGAGCCC 
GGCCGGTTCG TGGCCGCGGT CGAGGACCGG CGCGGGCTGT GGACGGTCGA GGGCACGGTG 
CCGGTGCTCG GTGCCGCCGA CGTCGCCGCG CTCGTGGAGA CCGTGGCCGC GGAGTCCGGC 
CGGATCGCGG CCCTGCTGGC CGGCGAGCTC CCGCACCGGC TGGTCGAGCA CGCCGAGGAG 
GCGGGCGTCG AGCTGCTGCC GTACGGCGGT GAGCTCGGTG CGTCGTGCAC CTGCGAGCAC 
TGGGTGGATC CGTGCGTGCA CGCTCTGGCC GTGCTCCACC AGCTCGCGTG GCTGGTCGAC 
GCCGACCCGT TCGTCCTGCT CCAGCTGCGC GGCCTGGCGC GCGACGAGCT GCTGGGACGA 
TTGCACGAGC GCTCCGCCGC TCCCCTGGTC GAGCCCCGAG ACTCGGCCGA CGGCACCGTG 
GACGAGGACG AACCGGACCT CCAGGCCGCC CTCGAGGCGG CGCTGTACGC CGCCCGGCTG 
CTGGTCGACC CGCTCAGCTG A
 
Protein sequence
MTGTVLHPRV APRRATARAT TWWGKAWVRA VDEAAYAEAD LVASRALARA GRVGQIATEP 
GRFVAAVEDR RGLWTVEGTV PVLGAADVAA LVETVAAESG RIAALLAGEL PHRLVEHAEE 
AGVELLPYGG ELGASCTCEH WVDPCVHALA VLHQLAWLVD ADPFVLLQLR GLARDELLGR 
LHERSAAPLV EPRDSADGTV DEDEPDLQAA LEAALYAARL LVDPLS